Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1  102602727  pentatricopeptide repeat-containing protein At2g27610 
 sly-u.5  101256059  pentatricopeptide repeat-containing protein At2g27610 
 ath-u.5  AT2G27610  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100818767  pentatricopeptide repeat-containing protein At2g27610 
 osa-u.5  4338983  pentatricopeptide repeat-containing protein At2g27610 

close


Top 50 coexpressed genes to 102602727 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102602727 (sot-r.1 coexpression data)

CoexMap"102602727"


sotLOC102602727 | Entrez gene ID : 102602727
Species sot sly ath gma osa hvu tae cit sbi ppo zma ghi cre vvi bna nta bdi bra mtr
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (768 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006349117.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 3,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for XP_006349117.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_006349117.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sot-r.1
for
102602727

.

sly-u.5
for
101256059

.

ath-u.5
for
AT2G27610

.

gma-u.5
for
100818767

.

osa-u.5
for
4338983

.


Ortholog ID: 11250
Species ath gma sly osa bra bra tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol AT2G27610 LOC100818767 LOC101256059 LOC4338983 LOC103864848 LOC117133525 LOC123139889 LOC123129013 LOC123404055 LOC107961685 LOC107953277 LOC8072507 LOC102602727 LOC102616922 LOC100846118 LOC107759418 LOC107796089
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610-like pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610 pentatricopeptide repeat-containing protein At2g27610-like pentatricopeptide repeat-containing protein At2g27610-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 2
hvu03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817307 100818767 101256059 4338983 103864848 117133525 123139889 123129013 123404055 107961685 107953277 8072507 102602727 102616922 100846118 107759418 107796089
The preparation time of this page was 0.1 [sec].