ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101257783	class V chitinase
sly-r.6	101257783	class V chitinase
sly-u.5	101244390	cysteine-rich receptor-like protein kinase 34
sly-u.5	101257483	nod factor hydrolase protein 1
sot-r.1	102599450	chitotriosidase-1-like
sot-r.1	102600109	acidic mammalian chitinase-like
sot-r.1	102590164	chitinase-3-like protein 2
nta-r.1	107779287	nod factor hydrolase protein 1-like
ath-u.5	AT4G19720	Glycosyl hydrolase family protein with chitinase insertion domain-containing protein
ath-u.5	ChiC	Glycosyl hydrolase family protein with chitinase insertion domain-containing protein
gma-u.5	100804105	class V chitinase
gma-u.5	100787511	class V chitinase CHIT5
bra-r.6	103857749	class V chitinase
bra-r.6	103834131	class V chitinase
vvi-u.5	100258593	cysteine-rich receptor-like protein kinase 34
vvi-u.5	100248333	class V chitinase CHIT5b
ppo-u.5	7479547	class V chitinase
ppo-u.5	7493413	putative cysteine-rich receptor-like protein kinase 20
mtr-u.5	25481955	class V chitinase CHIT5a-like
mtr-u.5	25490140	class V chitinase
mtr-u.5	25490142	class V chitinase
ghi-r.1	107890470	class V chitinase CHIT5b
ghi-r.1	107890472	putative cysteine-rich receptor-like protein kinase 20
bna-r.1	125575009	class V chitinase-like
bna-r.1	106443513	class V chitinase-like
bna-r.1	125606941	class V chitinase-like
cit-r.1	102618640	cysteine-rich receptor-like protein kinase 6
cit-r.1	102610714	uncharacterized LOC102610714
osa-u.5	4335610	class V chitinase
osa-u.5	4350476	nod factor hydrolase protein 1
zma-u.5	100191620	uncharacterized LOC100191620
zma-u.5	100383770	uncharacterized LOC100383770
sbi-r.1	8064408	chitinase-3-like protein 1
bdi-r.1	100842821	class V chitinase
cre-r.1	CHLRE_13g570700v5	uncharacterized protein
cre-r.1	CHLRE_07g317250v5	uncharacterized protein
cre-r.1	CHLRE_05g233304v5	uncharacterized protein

Top 50 coexpressed genes to 101257783 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101257783 (sly-u.5 coexpression data)

CoexMap"101257783"

[Cytoscape]

Annotation

functional annotation

KEGG

sly00520 [list] [network] Amino sugar and nucleotide sugar metabolism (133 genes)

GO BP

GO:0006032 [list] [network] chitin catabolic process	(19 genes)	IEA
GO:0005975 [list] [network] carbohydrate metabolic process	(703 genes)	IEA

GO CC

GO:0005576 [list] [network] extracellular region

(261 genes)

IEA

GO MF

GO:0008061 [list] [network] chitin binding	(17 genes)	IEA
GO:0004568 [list] [network] chitinase activity	(24 genes)	IEA

Protein

XP_004242562.2 [sequence] [blastp]

Subcellular
localization
wolf

E.R. 2, E.R._plas 2, plas 1, nucl 1, mito 1, chlo 1, extr 1, vacu 1, golg 1, cyto_nucl 1, cyto_mito 1, cysk_nucl 1

(predict for XP_004242562.2)

Subcellular
localization
TargetP

scret 9

(predict for XP_004242562.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101257783	sly-r.6 for 101257783	sly-u.5 for 101244390	sly-u.5 for 101257483	sot-r.1 for 102599450	sot-r.1 for 102600109	sot-r.1 for 102590164	nta-r.1 for 107779287	ath-u.5 for AT4G19720	ath-u.5 for ChiC	gma-u.5 for 100804105	gma-u.5 for 100787511	bra-r.6 for 103857749	bra-r.6 for 103834131	vvi-u.5 for 100258593	vvi-u.5 for 100248333	ppo-u.5 for 7479547	ppo-u.5 for 7493413	mtr-u.5 for 25481955	mtr-u.5 for 25490140	mtr-u.5 for 25490142	ghi-r.1 for 107890470	ghi-r.1 for 107890472	bna-r.1 for 125575009	bna-r.1 for 106443513	bna-r.1 for 125606941	cit-r.1 for 102618640	cit-r.1 for 102610714	osa-u.5 for 4335610	osa-u.5 for 4350476	zma-u.5 for 100191620	zma-u.5 for 100383770	sbi-r.1 for 8064408	bdi-r.1 for 100842821	cre-r.1 for CHLRE_13g570700v5	cre-r.1 for CHLRE_07g317250v5	cre-r.1 for CHLRE_05g233304v5

Ortholog

Ortholog ID: 643

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

sbi

bdi

cre

Symbol

Function^*

class V chitinase

nod factor hydrolase protein 1

chitotriosidase-1-like

G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410

G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520

class V chitinase-like

cysteine-rich receptor-like protein kinase 19

class V chitinase-like

Glycosyl hydrolase family protein with chitinase insertion domain-containing protein

class V chitinase

class V chitinase CHIT5

class V chitinase

class V chitinase CHIT5b

class V chitinase CHIT5

class V chitinase

putative cysteine-rich receptor-like protein kinase 20

class V chitinase

cysteine-rich receptor-like protein kinase 7

class V chitinase

nod factor hydrolase protein 1-like

class V chitinase CHIT5b

putative cysteine-rich receptor-like protein kinase 20

class V chitinase-like

class V chitinase

cysteine-rich receptor-like protein kinase 6

class V chitinase-like

class V chitinase

nod factor hydrolase protein 1

uncharacterized LOC100191620

uncharacterized LOC100383770

chitinase-3-like protein 1

class V chitinase

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	5
sly04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	11
sot04016	MAPK signaling pathway - plant	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot04141	Protein processing in endoplasmic reticulum	2
sot04145	Phagosome	2
sot04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	4
sot00520	Amino sugar and nucleotide sugar metabolism	3
sot04145	Phagosome	2
sot04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	4
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	4
ath04981	Folate transport and metabolism	4
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	4
gma04016	MAPK signaling pathway - plant	4
gma04626	Plant-pathogen interaction	3
gma00500	Starch and sucrose metabolism	2
gma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
bra00520	Amino sugar and nucleotide sugar metabolism	2
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2
vvi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00073	Cutin, suberine and wax biosynthesis	3
ppo02010	ABC transporters	2
ppo00062	Fatty acid elongation	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	3
mtr04016	MAPK signaling pathway - plant	2
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	3
mtr04016	MAPK signaling pathway - plant	2
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	3
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	5
bna00040	Pentose and glucuronate interconversions	4
bna00430	Taurine and hypotaurine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00620	Pyruvate metabolism	6
osa01200	Carbon metabolism	6
osa00061	Fatty acid biosynthesis	5
osa01212	Fatty acid metabolism	5
osa00010	Glycolysis / Gluconeogenesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	3
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	2
bdi04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

101257783

101257483

102599450

102589184

102588540

107789337

107790460

107814956

827716

100804105

100787511

103857749

103834131

100248333

100244749

100241931

7493413

18100581

18103408

25490140

25490142

25493983

107890470

107890472

125575009

125606941

106437640

102618640

112498947

102623247

4335610

4350476

100191620

100383770

8064408

100842821

5719131

5726545

5727757

The preparation time of this page was 0.4 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	sbi	bdi	cre	tae	hvu
Paralog	4	3	1	2	2	2	2	2	3	2	3	2	2	2	1	1	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101257783 (sly-u.5 coexpression data)

Top 50 enrichment test to 101257783 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**