ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
cre-r.1	CHLRE_07g317250v5	uncharacterized protein
cre-r.1	CHLRE_05g233304v5	uncharacterized protein
cre-r.1	CHLRE_13g570700v5	uncharacterized protein
ath-u.5	AT4G19720	Glycosyl hydrolase family protein with chitinase insertion domain-containing protein
ath-u.5	ChiC	Glycosyl hydrolase family protein with chitinase insertion domain-containing protein
gma-u.5	100804105	class V chitinase
gma-u.5	100787511	class V chitinase CHIT5
sly-u.5	101257483	nod factor hydrolase protein 1
sly-u.5	101257783	class V chitinase
osa-u.5	4350476	nod factor hydrolase protein 1
osa-u.5	4335610	class V chitinase
zma-u.5	100383770	uncharacterized LOC100383770
zma-u.5	100191620	uncharacterized LOC100191620
bra-r.6	103857749	class V chitinase
bra-r.6	103834131	class V chitinase
vvi-u.5	100261874	class V chitinase
vvi-u.5	100241931	class V chitinase
vvi-u.5	100248333	class V chitinase CHIT5b
ppo-u.5	7493413	putative cysteine-rich receptor-like protein kinase 20
ppo-u.5	7479547	class V chitinase
mtr-u.5	25490142	class V chitinase
mtr-u.5	25493983	nod factor hydrolase protein 1-like
mtr-u.5	25493984	class V chitinase CHIT5b-like
ghi-r.1	107893423	probable LRR receptor-like serine/threonine-protein kinase At5g37450
ghi-r.1	107893422	L-type lectin-domain containing receptor kinase I.8
ghi-r.1	107899828	class V chitinase CHIT5b
bna-r.1	125575009	class V chitinase-like
bna-r.1	106443513	class V chitinase-like
bna-r.1	106437640	class V chitinase
sbi-r.1	8064408	chitinase-3-like protein 1
sot-r.1	102600109	acidic mammalian chitinase-like
sot-r.1	107059447	chitinase-3-like protein 1
sot-r.1	102599450	chitotriosidase-1-like
cit-r.1	102623247	class V chitinase-like
cit-r.1	102618640	cysteine-rich receptor-like protein kinase 6
bdi-r.1	100842821	class V chitinase
nta-r.1	107779287	nod factor hydrolase protein 1-like
nta-r.1	107789337	class V chitinase-like

Top 50 coexpressed genes to CHLRE_07g317250v5 (cre-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to CHLRE_07g317250v5 (cre-r.1 coexpression data)

CoexMap"5726545"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006032 [list] [network] chitin catabolic process	(4 genes)	IEA
GO:0005975 [list] [network] carbohydrate metabolic process	(185 genes)	IEA

GO CC

GO:0005576 [list] [network] extracellular region

(57 genes)

IEA

GO MF

GO:0004568 [list] [network] chitinase activity	(4 genes)	IEA
GO:0008061 [list] [network] chitin binding	(12 genes)	IEA

Protein

XP_042922469.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, extr 4, nucl 1

(predict for XP_042922469.1)

Subcellular
localization
TargetP

scret 7, mito 4

(predict for XP_042922469.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_07g317250v5	cre-r.1 for CHLRE_05g233304v5	cre-r.1 for CHLRE_13g570700v5	ath-u.5 for AT4G19720	ath-u.5 for ChiC	gma-u.5 for 100804105	gma-u.5 for 100787511	sly-u.5 for 101257483	sly-u.5 for 101257783	osa-u.5 for 4350476	osa-u.5 for 4335610	zma-u.5 for 100383770	zma-u.5 for 100191620	bra-r.6 for 103857749	bra-r.6 for 103834131	vvi-u.5 for 100261874	vvi-u.5 for 100241931	vvi-u.5 for 100248333	ppo-u.5 for 7493413	ppo-u.5 for 7479547	mtr-u.5 for 25490142	mtr-u.5 for 25493983	mtr-u.5 for 25493984	ghi-r.1 for 107893423	ghi-r.1 for 107893422	ghi-r.1 for 107899828	bna-r.1 for 125575009	bna-r.1 for 106443513	bna-r.1 for 106437640	sbi-r.1 for 8064408	sot-r.1 for 102600109	sot-r.1 for 107059447	sot-r.1 for 102599450	cit-r.1 for 102623247	cit-r.1 for 102618640	bdi-r.1 for 100842821	nta-r.1 for 107779287	nta-r.1 for 107789337

Ortholog

Ortholog ID: 643

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

Glycosyl hydrolase family protein with chitinase insertion domain-containing protein

class V chitinase

class V chitinase CHIT5

nod factor hydrolase protein 1

class V chitinase

nod factor hydrolase protein 1

class V chitinase

uncharacterized LOC100383770

uncharacterized LOC100191620

class V chitinase

class V chitinase CHIT5b

class V chitinase CHIT5

putative cysteine-rich receptor-like protein kinase 20

class V chitinase

cysteine-rich receptor-like protein kinase 7

class V chitinase

nod factor hydrolase protein 1-like

class V chitinase

putative cysteine-rich receptor-like protein kinase 20

class V chitinase CHIT5b

class V chitinase-like

class V chitinase

class V chitinase-like

chitinase-3-like protein 1

chitotriosidase-1-like

G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410

G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520

class V chitinase-like

cysteine-rich receptor-like protein kinase 6

class V chitinase-like

class V chitinase

class V chitinase-like

cysteine-rich receptor-like protein kinase 19

class V chitinase-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	4
ath04981	Folate transport and metabolism	4
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	4
gma04016	MAPK signaling pathway - plant	4
gma04626	Plant-pathogen interaction	3
gma00500	Starch and sucrose metabolism	2
gma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	5
sly04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00620	Pyruvate metabolism	6
osa01200	Carbon metabolism	6
osa00061	Fatty acid biosynthesis	5
osa01212	Fatty acid metabolism	5
osa00010	Glycolysis / Gluconeogenesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	3
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
bra00520	Amino sugar and nucleotide sugar metabolism	2
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2
vvi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00073	Cutin, suberine and wax biosynthesis	3
ppo02010	ABC transporters	2
ppo00062	Fatty acid elongation	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	3
mtr04016	MAPK signaling pathway - plant	2
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	3
mtr04016	MAPK signaling pathway - plant	2
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00906	Carotenoid biosynthesis	3
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	5
bna00040	Pentose and glucuronate interconversions	4
bna00430	Taurine and hypotaurine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	11
sot04016	MAPK signaling pathway - plant	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot04141	Protein processing in endoplasmic reticulum	2
sot04145	Phagosome	2
sot04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	4
sot00520	Amino sugar and nucleotide sugar metabolism	3
sot04145	Phagosome	2
sot04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	4
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

5726545

5727757

5719131

827716

100804105

100787511

101257483

101257783

4350476

4335610

100383770

100191620

103857749

103834131

100241931

100248333

100244749

7493413

18100581

18103408

25490142

25493983

25490140

107890472

107890470

125575009

106437640

125606941

8064408

102599450

102589184

102588540

102623247

102618640

112498947

100842821

107789337

107790460

107814956

The preparation time of this page was 0.1 [sec].


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	ghi	bna	sbi	sot	cit	bdi	nta	tae	hvu
Paralog	3	2	2	2	2	2	2	3	2	3	3	3	1	3	2	1	2	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_07g317250v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_07g317250v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**