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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101258779   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 sly-r.6   101258779   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 ath-u.5   ARC3   GTP binding protein 
 gma-u.5   100306163   uncharacterized LOC100306163 
 vvi-u.5   100264763   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 ppo-u.5   7462635   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 mtr-u.5   25485592   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 
 osa-u.5   4347814   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic 
 zma-u.5   103643007   protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 

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Top 50 coexpressed genes to 101258779 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101258779 (sly-u.5 coexpression data)

CoexMap"101258779"


slyLOC101258779 | Entrez gene ID : 101258779      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010020 [list] [network] chloroplast fission  (16 genes)  IEA  
GO CC
GO:0035452 [list] [network] extrinsic component of plastid membrane  (1 genes)  IEA  
GO:0009707 [list] [network] chloroplast outer membrane  (28 genes)  IEA  
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO MF
Protein XP_004228899.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_004228899.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004228899.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101258779

.
sly-r.6
for
101258779

.
ath-u.5
for
ARC3

.
gma-u.5
for
100306163

.
vvi-u.5
for
100264763

.
ppo-u.5
for
7462635

.
mtr-u.5
for
25485592

.
osa-u.5
for
4347814

.
zma-u.5
for
103643007

.


Ortholog ID: 11523
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol ARC3 LOC100306163 LOC101258779 LOC4347814 LOC103643007 LOC103831960 LOC100264763 LOC7462635 LOC25485592 LOC123113053 LOC123122572 LOC123451927 LOC107922529 LOC107922665 LOC106354527 LOC106403224 LOC8077240 LOC102589445 LOC102608775 LOC100833206 LOC107804253 LOC107759070
Function* GTP binding protein uncharacterized LOC100306163 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 4
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
nta04820 Cytoskeleton in muscle cells 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843839 100306163 101258779 4347814 103643007 103831960 100264763 7462635 25485592 123113053 123122572 123451927 107922529 107922665 106354527 106403224 8077240 102589445 102608775 100833206 107804253 107759070
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