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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101259755   AP3-complex subunit beta-A 
 sly-r.6   101259755   AP3-complex subunit beta-A 
 sot-r.1   102601904   AP3-complex subunit beta-A 
 nta-r.1   107803266   AP3-complex subunit beta-A-like 
 nta-r.1   107831473   AP3-complex subunit beta-A 
 ath-u.5   PAT2   protein affected trafficking 2 
 gma-u.5   100806345   AP3-complex subunit beta-A 
 gma-u.5   100802718   AP3-complex subunit beta-A 
 bra-r.6   103841454   AP3-complex subunit beta-A 
 vvi-u.5   100251289   AP3-complex subunit beta-A 
 ppo-u.5   7458139   AP3-complex subunit beta-A 
 mtr-u.5   11433764   AP3-complex subunit beta-A 
 ghi-r.1   107904127   AP3-complex subunit beta-A 
 ghi-r.1   107897306   AP3-complex subunit beta-A 
 bna-r.1   106415706   AP3-complex subunit beta-A 
 bna-r.1   106396408   AP3-complex subunit beta-A 
 cit-r.1   102624526   AP3-complex subunit beta-A 
 osa-u.5   4326400   AP3-complex subunit beta-A 
 zma-u.5   100383432   AP3-complex subunit beta-A 
 tae-r.2   123081006   AP3-complex subunit beta-A 
 tae-r.2   123072849   AP3-complex subunit beta-A 
 tae-r.2   123063697   AP3-complex subunit beta-A 
 hvu-r.1   123445704   AP3-complex subunit beta-A 
 sbi-r.1   8068578   AP3-complex subunit beta-A 
 bdi-r.1   100831932   AP3-complex subunit beta-A 

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Top 50 coexpressed genes to 101259755 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101259755 (sly-u.5 coexpression data)

CoexMap"101259755"


slyLOC101259755 | Entrez gene ID : 101259755      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 2 1 1 1 1 2 2 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04142 [list] [network] Lysosome (84 genes)
GO BP
GO:0006886 [list] [network] intracellular protein transport  (272 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (469 genes)  IEA  
GO CC
GO:0030123 [list] [network] AP-3 adaptor complex  (3 genes)  IEA  
GO:0030117 [list] [network] membrane coat  (75 genes)  IEA  
GO MF
Protein XP_004240827.1 [sequence] [blastp]
XP_025887232.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 2,  nucl 1,  vacu 1,  E.R. 1,  cysk 1,  cysk_nucl 1,  E.R._vacu 1  (predict for XP_004240827.1)
chlo 5,  cyto 2,  nucl 1,  vacu 1,  E.R. 1,  cysk 1,  cysk_nucl 1,  E.R._vacu 1  (predict for XP_025887232.1)
Subcellular
localization
TargetP
other 6,  scret 3  (predict for XP_004240827.1)
other 6,  scret 3  (predict for XP_025887232.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101259755
sly-r.6
for
101259755
sot-r.1
for
102601904
nta-r.1
for
107803266
nta-r.1
for
107831473
ath-u.5
for
PAT2
gma-u.5
for
100806345
gma-u.5
for
100802718
bra-r.6
for
103841454
vvi-u.5
for
100251289
ppo-u.5
for
7458139
mtr-u.5
for
11433764
ghi-r.1
for
107904127
ghi-r.1
for
107897306
bna-r.1
for
106415706
bna-r.1
for
106396408
cit-r.1
for
102624526
osa-u.5
for
4326400
zma-u.5
for
100383432
tae-r.2
for
123081006
tae-r.2
for
123072849
tae-r.2
for
123063697
hvu-r.1
for
123445704
sbi-r.1
for
8068578
bdi-r.1
for
100831932


Ortholog ID: 10824
Species sly sot nta nta ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC101259755 LOC102601904 LOC107803266 LOC107831473 PAT2 LOC100806345 LOC100802718 LOC103841454 LOC100251289 LOC7458139 LOC11433764 LOC107904127 LOC107897306 LOC106415706 LOC106396408 LOC102624526 LOC4326400 LOC100383432 LOC123081006 LOC123072849 LOC123063697 LOC123445704 LOC8068578 LOC100831932
Function* AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A-like AP3-complex subunit beta-A protein affected trafficking 2 AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A AP3-complex subunit beta-A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 4
nta04142 Lysosome 2
nta03082 ATP-dependent chromatin remodeling 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta04148 Efferocytosis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 2
ath04120 Ubiquitin mediated proteolysis 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 3
gma04070 Phosphatidylinositol signaling system 2
gma04142 Lysosome 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
gma00562 Inositol phosphate metabolism 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 5
bra04141 Protein processing in endoplasmic reticulum 3
bra03018 RNA degradation 2
bra04144 Endocytosis 2
bra05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi04142 Lysosome 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 4
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 5
mtr00562 Inositol phosphate metabolism 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04148 Efferocytosis 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04148 Efferocytosis 2
bna04712 Circadian rhythm - plant 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 3
cit03040 Spliceosome 3
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma04142 Lysosome 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
tae04144 Endocytosis 3
tae05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi00310 Lysine degradation 2
sbi04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101259755 102601904 107803266 107831473 824714 100806345 100802718 103841454 100251289 7458139 11433764 107904127 107897306 106415706 106396408 102624526 4326400 100383432 123081006 123072849 123063697 123445704 8068578 100831932
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