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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101259933   rhamnogalacturonan I rhamnosyltransferase 1 
 sly-r.6   101259933   rhamnogalacturonan I rhamnosyltransferase 1 
 ath-u.5   AT2G03280   O-fucosyltransferase family protein 
 ath-u.5   AT1G14020   O-fucosyltransferase family protein 
 gma-u.5   100818652   rhamnogalacturonan I rhamnosyltransferase 1 
 gma-u.5   100795625   rhamnogalacturonan I rhamnosyltransferase 1 
 vvi-u.5   100247184   rhamnogalacturonan I rhamnosyltransferase 1 
 ppo-u.5   7460710   rhamnogalacturonan I rhamnosyltransferase 1 
 ppo-u.5   7481562   rhamnogalacturonan I rhamnosyltransferase 1 
 mtr-u.5   11408902   rhamnogalacturonan I rhamnosyltransferase 1 
 mtr-u.5   25492967   rhamnogalacturonan I rhamnosyltransferase 1 
 osa-u.5   4325193   rhamnogalacturonan I rhamnosyltransferase 1 
 osa-u.5   4331760   rhamnogalacturonan I rhamnosyltransferase 1 
 osa-u.5   4332719   rhamnogalacturonan I rhamnosyltransferase 4 
 zma-u.5   103631769   O-fucosyltransferase family protein 
 zma-u.5   103634607   O-fucosyltransferase family protein 
 zma-u.5   103639539   O-fucosyltransferase family protein 

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Top 50 coexpressed genes to 101259933 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101259933 (sly-u.5 coexpression data)

CoexMap"101259933"


slyLOC101259933 | Entrez gene ID : 101259933      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 2 1 2 2 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (632 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
Protein XP_004239107.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  E.R. 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_004239107.2)
Subcellular
localization
TargetP
other 9  (predict for XP_004239107.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101259933

.
sly-r.6
for
101259933

.
ath-u.5
for
AT2G03280

.
ath-u.5
for
AT1G14020

.
gma-u.5
for
100818652

.
gma-u.5
for
100795625

.
vvi-u.5
for
100247184

.
ppo-u.5
for
7460710

.
ppo-u.5
for
7481562

.
mtr-u.5
for
11408902

.
mtr-u.5
for
25492967

.
osa-u.5
for
4325193

.
osa-u.5
for
4331760

.
osa-u.5
for
4332719

.
zma-u.5
for
103631769

.
zma-u.5
for
103634607

.
zma-u.5
for
103639539

.


Ortholog ID: 3423
Species ath ath gma sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna sbi sbi sot sot cit bdi bdi nta nta
Symbol AT2G03280 AT1G14020 LOC100818652 LOC101259933 LOC4325193 LOC4332719 LOC103631769 LOC103634857 LOC103839412 LOC103836087 LOC100247184 LOC7460710 LOC7481562 LOC11408902 LOC25492967 LOC123092250 LOC123093304 LOC123442816 LOC123448742 LOC107920442 LOC107946402 LOC106382336 LOC8084560 LOC8078494 LOC102602359 LOC102587596 LOC102629688 LOC100830734 LOC100826488 LOC107809814 LOC107778202
Function* O-fucosyltransferase family protein O-fucosyltransferase family protein rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 4 O-fucosyltransferase family protein rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 4 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 4 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1-like rhamnogalacturonan I rhamnosyltransferase 4-like rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 uncharacterized protein At1g04910 uncharacterized protein At1g04910 uncharacterized protein At1g04910-like uncharacterized protein At1g04910 rhamnogalacturonan I rhamnosyltransferase 1 O-fucosyltransferase 3 O-fucosyltransferase 3 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 7
sly00510 N-Glycan biosynthesis 4
sly00513 Various types of N-glycan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra00040 Pentose and glucuronate interconversions 2
bra00053 Ascorbate and aldarate metabolism 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00514 Other types of O-glycan biosynthesis 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04144 Endocytosis 3
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae00052 Galactose metabolism 3
tae00511 Other glycan degradation 3
tae00531 Glycosaminoglycan degradation 3
tae00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00460 Cyanoamino acid metabolism 2
bdi00500 Starch and sucrose metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta04517 IgSF CAM signaling 2
nta04518 Integrin signaling 2
nta04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814857 837963 100818652 101259933 4325193 4332719 103631769 103634857 103839412 103836087 100247184 7460710 7481562 11408902 25492967 123092250 123093304 123442816 123448742 107920442 107946402 106382336 8084560 8078494 102602359 102587596 102629688 100830734 100826488 107809814 107778202
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