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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107920442   rhamnogalacturonan I rhamnosyltransferase 1 
 ghi-r.1   107946402   rhamnogalacturonan I rhamnosyltransferase 1 
 ghi-r.1   107910113   rhamnogalacturonan I rhamnosyltransferase 1 
 ath-u.5   AT2G03280   O-fucosyltransferase family protein 
 ath-u.5   AT1G14020   O-fucosyltransferase family protein 
 bra-r.6   103836087   rhamnogalacturonan I rhamnosyltransferase 1 
 bra-r.6   103839412   rhamnogalacturonan I rhamnosyltransferase 4 
 bna-r.1   BNACNNG39590D   rhamnogalacturonan I rhamnosyltransferase 1 
 bna-r.1   BNAC09G52330D   rhamnogalacturonan I rhamnosyltransferase 4 
 cit-r.1   102629688   rhamnogalacturonan I rhamnosyltransferase 1 
 gma-u.5   100818652   rhamnogalacturonan I rhamnosyltransferase 1 
 gma-u.5   100795625   rhamnogalacturonan I rhamnosyltransferase 1 
 vvi-u.5   100247184   rhamnogalacturonan I rhamnosyltransferase 1 
 ppo-u.5   7460710   rhamnogalacturonan I rhamnosyltransferase 1 
 ppo-u.5   7481562   rhamnogalacturonan I rhamnosyltransferase 1 
 mtr-u.5   25492967   rhamnogalacturonan I rhamnosyltransferase 1 
 mtr-u.5   11408902   rhamnogalacturonan I rhamnosyltransferase 1 
 sly-u.5   101259933   rhamnogalacturonan I rhamnosyltransferase 1 
 sot-r.1   102587596   uncharacterized protein At1g04910 
 sot-r.1   102602359   uncharacterized protein At1g04910-like 
 nta-r.1   107778202   rhamnogalacturonan I rhamnosyltransferase 1-like 
 nta-r.1   107809814   rhamnogalacturonan I rhamnosyltransferase 1 
 osa-u.5   4325193   rhamnogalacturonan I rhamnosyltransferase 1 
 osa-u.5   4331760   rhamnogalacturonan I rhamnosyltransferase 1 
 osa-u.5   4332719   rhamnogalacturonan I rhamnosyltransferase 4 
 zma-u.5   103631769   O-fucosyltransferase family protein 
 zma-u.5   103634857   rhamnogalacturonan I rhamnosyltransferase 1 
 zma-u.5   103639539   O-fucosyltransferase family protein 
 tae-r.2   123060281   rhamnogalacturonan I rhamnosyltransferase 1 
 tae-r.2   123098572   rhamnogalacturonan I rhamnosyltransferase 1 
 tae-r.2   123093304   rhamnogalacturonan I rhamnosyltransferase 1 
 hvu-r.1   123442816   rhamnogalacturonan I rhamnosyltransferase 1-like 
 hvu-r.1   123448742   rhamnogalacturonan I rhamnosyltransferase 4-like 
 hvu-r.1   123449554   rhamnogalacturonan I rhamnosyltransferase 1-like 
 sbi-r.1   8059823   uncharacterized protein At1g04910 
 sbi-r.1   8078494   uncharacterized protein At1g04910 
 sbi-r.1   8084560   uncharacterized protein At1g04910 
 bdi-r.1   100826488   O-fucosyltransferase 3 
 bdi-r.1   100830734   O-fucosyltransferase 3 

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Top 50 coexpressed genes to 107920442 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107920442 (ghi-r.1 coexpression data)

CoexMap"107920442"


ghiLOC107920442 | Entrez gene ID : 107920442    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 2 2 1 2 1 2 2 1 2 2 3 3 3 3 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
Protein XP_040939083.1 [sequence] [blastp]
XP_040939084.1 [sequence] [blastp]
XP_040939085.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_040939083.1)
plas 5,  cyto 2,  nucl 1,  cyto_E.R. 1  (predict for XP_040939084.1)
nucl 6,  cyto 3  (predict for XP_040939085.1)
Subcellular
localization
TargetP
other 9  (predict for XP_040939083.1)
other 9  (predict for XP_040939084.1)
other 9  (predict for XP_040939085.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107920442
ghi-r.1
for
107946402
ghi-r.1
for
107910113
ath-u.5
for
AT2G03280
ath-u.5
for
AT1G14020
bra-r.6
for
103836087
bra-r.6
for
103839412
bna-r.1
for
BNACNNG39590D
bna-r.1
for
BNAC09G52330D
cit-r.1
for
102629688
gma-u.5
for
100818652
gma-u.5
for
100795625
vvi-u.5
for
100247184
ppo-u.5
for
7460710
ppo-u.5
for
7481562
mtr-u.5
for
25492967
mtr-u.5
for
11408902
sly-u.5
for
101259933
sot-r.1
for
102587596
sot-r.1
for
102602359
nta-r.1
for
107778202
nta-r.1
for
107809814
osa-u.5
for
4325193
osa-u.5
for
4331760
osa-u.5
for
4332719
zma-u.5
for
103631769
zma-u.5
for
103634857
zma-u.5
for
103639539
tae-r.2
for
123060281
tae-r.2
for
123098572
tae-r.2
for
123093304
hvu-r.1
for
123442816
hvu-r.1
for
123448742
hvu-r.1
for
123449554
sbi-r.1
for
8059823
sbi-r.1
for
8078494
sbi-r.1
for
8084560
bdi-r.1
for
100826488
bdi-r.1
for
100830734


Ortholog ID: 3423
Species ghi ghi ghi ath ath bra bra bna bna cit gma gma vvi ppo ppo mtr mtr sly sot sot nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi
Symbol LOC107920442 LOC107946402 LOC107910113 AT2G03280 AT1G14020 LOC103836087 LOC103839412 BNAC09G52330D LOC106382336 LOC102629688 LOC100818652 LOC100775903 LOC100247184 LOC7460710 LOC7481562 LOC25492967 LOC11408902 LOC101259933 LOC102587596 LOC102602359 LOC107778202 LOC107809814 LOC4325193 LOC4331760 LOC4332719 LOC103631769 LOC103634857 LOC103649706 LOC123060281 LOC123093304 LOC123092250 LOC123442816 LOC123448742 LOC123449554 LOC8059823 LOC8078494 LOC8084560 LOC100826488 LOC100830734
Function* rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 O-fucosyltransferase family protein O-fucosyltransferase family protein rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 4 rhamnogalacturonan I rhamnosyltransferase 4 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 uncharacterized protein At1g04910 uncharacterized protein At1g04910-like rhamnogalacturonan I rhamnosyltransferase 1-like rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 4 O-fucosyltransferase family protein rhamnogalacturonan I rhamnosyltransferase 1 uncharacterized LOC103649706 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 1 rhamnogalacturonan I rhamnosyltransferase 4 rhamnogalacturonan I rhamnosyltransferase 1-like rhamnogalacturonan I rhamnosyltransferase 4-like rhamnogalacturonan I rhamnosyltransferase 1-like uncharacterized protein At1g04910 uncharacterized protein At1g04910 uncharacterized protein At1g04910 O-fucosyltransferase 3 O-fucosyltransferase 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra00040 Pentose and glucuronate interconversions 2
bra00053 Ascorbate and aldarate metabolism 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00514 Other types of O-glycan biosynthesis 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 7
sly00510 N-Glycan biosynthesis 4
sly00513 Various types of N-glycan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta04517 IgSF CAM signaling 2
nta04518 Integrin signaling 2
nta04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 5
zma00020 Citrate cycle (TCA cycle) 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae00052 Galactose metabolism 3
tae00511 Other glycan degradation 3
tae00531 Glycosaminoglycan degradation 3
tae00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04144 Endocytosis 3
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00460 Cyanoamino acid metabolism 2
bdi00500 Starch and sucrose metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107920442 107946402 107910113 814857 837963 103836087 103839412 106437946 106382336 102629688 100818652 100775903 100247184 7460710 7481562 25492967 11408902 101259933 102587596 102602359 107778202 107809814 4325193 4331760 4332719 103631769 103634857 103649706 123060281 123093304 123092250 123442816 123448742 123449554 8059823 8078494 8084560 100826488 100830734
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