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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101260240   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 sly-r.6   101260240   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 sly-u.5   101246329   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 sly-u.5   101251957   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 sly-u.5   101256096   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 ath-u.5   ATB BETA   Protein phosphatase 2A, regulatory subunit PR55 
 ath-u.5   B ALPHA   protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform 
 gma-u.5   100786941   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 gma-u.5   100789058   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 gma-u.5   100790801   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 vvi-u.5   100265267   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 vvi-u.5   100266437   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 vvi-u.5   100257641   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 ppo-u.5   18094825   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 ppo-u.5   7462265   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 ppo-u.5   7463742   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 mtr-u.5   25500415   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 mtr-u.5   11425778   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 mtr-u.5   11419844   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 osa-u.5   9270873   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 osa-u.5   4341313   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 osa-u.5   4328769   serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B 
 zma-u.5   100383125   uncharacterized LOC100383125 
 zma-u.5   100193694   uncharacterized LOC100193694 
 zma-u.5   100191991   serine/threonine protein phosphatase regulatory subunit Bbeta isoform 

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Top 50 coexpressed genes to 101260240 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101260240 (sly-u.5 coexpression data)

CoexMap"101260240"


slyLOC101260240 | Entrez gene ID : 101260240      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03015 [list] [network] mRNA surveillance pathway (129 genes)
sly04382 [list] [network] Cornified envelope formation (35 genes)
GO BP
GO CC
GO:0000159 [list] [network] protein phosphatase type 2A complex  (21 genes)  IEA  
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO MF
GO:0019888 [list] [network] protein phosphatase regulator activity  (58 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004241940.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 5,  nucl 4  (predict for XP_004241940.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004241940.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101260240

.
sly-r.6
for
101260240

.
sly-u.5
for
101246329

.
sly-u.5
for
101251957

.
sly-u.5
for
101256096

.
ath-u.5
for
ATB BETA

.
ath-u.5
for
B ALPHA

.
gma-u.5
for
100786941

.
gma-u.5
for
100789058

.
gma-u.5
for
100790801

.
vvi-u.5
for
100265267

.
vvi-u.5
for
100266437

.
vvi-u.5
for
100257641

.
ppo-u.5
for
18094825

.
ppo-u.5
for
7462265

.
ppo-u.5
for
7463742

.
mtr-u.5
for
25500415

.
mtr-u.5
for
11425778

.
mtr-u.5
for
11419844

.
osa-u.5
for
9270873

.
osa-u.5
for
4341313

.
osa-u.5
for
4328769

.
zma-u.5
for
100383125

.
zma-u.5
for
100193694

.
zma-u.5
for
100191991

.


Ortholog ID: 1027
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol B ALPHA ATB BETA LOC100795137 LOC100790801 LOC101251957 LOC101246329 LOC4328769 LOC4341313 LOC100383125 LOC100191387 LOC103871268 LOC103835944 LOC100265267 LOC100257641 LOC7463742 LOC18096730 LOC11419844 LOC11425778 LOC123144474 LOC123156267 LOC123406345 LOC123407426 LOC107891721 LOC107895343 LOC106427161 LOC125609510 CHLRE_01g055420v5 LOC8061986 LOC110434866 LOC102586381 LOC102584203 LOC102608811 LOC102628048 LOC100837992 LOC100835234 LOC107776791 LOC107788567
Function* protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform Protein phosphatase 2A, regulatory subunit PR55 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B uncharacterized LOC100383125 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B uncharacterized protein serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath04120 Ubiquitin mediated proteolysis 2
ath00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma04382 Cornified envelope formation 3
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 5
sly04382 Cornified envelope formation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa04142 Lysosome 2
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 3
osa04382 Cornified envelope formation 3
osa04144 Endocytosis 2
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma04382 Cornified envelope formation 3
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04382 Cornified envelope formation 4
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 2
mtr03022 Basal transcription factors 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
tae05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae04382 Cornified envelope formation 5
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 3
hvu04382 Cornified envelope formation 3
hvu04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 9
ghi04382 Cornified envelope formation 8
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 3
ghi04382 Cornified envelope formation 3
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04382 Cornified envelope formation 8
bna03015 mRNA surveillance pathway 6
bna00600 Sphingolipid metabolism 2
bna04144 Endocytosis 2
bna04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 7
bna04382 Cornified envelope formation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03015 mRNA surveillance pathway 4
cre00190 Oxidative phosphorylation 3
cre04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 4
sot04141 Protein processing in endoplasmic reticulum 3
sot03015 mRNA surveillance pathway 3
sot04382 Cornified envelope formation 3
sot05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03015 mRNA surveillance pathway 2
cit04382 Cornified envelope formation 2
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 3
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03060 Protein export 2
bdi00510 N-Glycan biosynthesis 2
bdi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi03015 mRNA surveillance pathway 2
bdi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta00020 Citrate cycle (TCA cycle) 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 6
nta04382 Cornified envelope formation 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841594 838348 100795137 100790801 101251957 101246329 4328769 4341313 100383125 100191387 103871268 103835944 100265267 100257641 7463742 18096730 11419844 11425778 123144474 123156267 123406345 123407426 107891721 107895343 106427161 125609510 5725732 8061986 110434866 102586381 102584203 102608811 102628048 100837992 100835234 107776791 107788567
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