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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101261015   mediator of RNA polymerase II transcription subunit 13 
 sly-r.6   101261015   mediator of RNA polymerase II transcription subunit 13 
 sly-m.5   101261015   mediator of RNA polymerase II transcription subunit 13 
 ath-u.5   GCT   RNA polymerase II transcription mediator 
 gma-u.5   100782017   mediator of RNA polymerase II transcription subunit 13 
 gma-u.5   100781873   mediator of RNA polymerase II transcription subunit 13 
 vvi-u.5   100263945   mediator of RNA polymerase II transcription subunit 13 
 ppo-u.5   7461357   mediator of RNA polymerase II transcription subunit 13 
 ppo-u.5   18094284   mediator of RNA polymerase II transcription subunit 13 
 mtr-u.5   11437356   mediator of RNA polymerase II transcription subunit 13 
 osa-u.5   4338949   mediator of RNA polymerase II transcription subunit 13 
 zma-u.5   100279985   uncharacterized LOC100279985 

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Top 50 coexpressed genes to 101261015 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101261015 (sly-u.5 coexpression data)

CoexMap"101261015"


slyLOC101261015 | Entrez gene ID : 101261015    
Species sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 3 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (133 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (47 genes)  IEA  
GO MF
GO:0003713 [list] [network] transcription coactivator activity  (45 genes)  IEA  
Protein XP_010319659.1 [sequence] [blastp]
XP_010319660.1 [sequence] [blastp]
XP_010319661.1 [sequence] [blastp]
XP_069153179.1 [sequence] [blastp]
XP_069153180.1 [sequence] [blastp]
XP_069153181.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cysk_nucl 3,  chlo 1,  extr 1,  vacu 1  (predict for XP_010319659.1)
nucl 4,  cysk_nucl 3,  chlo 1,  extr 1,  vacu 1  (predict for XP_010319660.1)
nucl 4,  chlo 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_010319661.1)
nucl 4,  chlo 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_069153179.1)
chlo 5,  nucl 1,  mito 1,  E.R. 1,  cysk_nucl 1  (predict for XP_069153180.1)
chlo 5,  nucl 1,  mito 1,  E.R. 1,  cysk_nucl 1  (predict for XP_069153181.1)
Subcellular
localization
TargetP
other 7  (predict for XP_010319659.1)
other 7  (predict for XP_010319660.1)
other 7  (predict for XP_010319661.1)
other 7  (predict for XP_069153179.1)
mito 8,  other 5  (predict for XP_069153180.1)
mito 8,  other 5  (predict for XP_069153181.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101261015
sly-r.6
for
101261015
sly-m.5
for
101261015
ath-u.5
for
GCT
gma-u.5
for
100782017
gma-u.5
for
100781873
vvi-u.5
for
100263945
ppo-u.5
for
7461357
ppo-u.5
for
18094284
mtr-u.5
for
11437356
osa-u.5
for
4338949
zma-u.5
for
100279985


Ortholog ID: 6424
Species sly sot nta nta ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna cit osa zma tae tae hvu hvu sbi bdi
Symbol LOC101261015 LOC102578156 LOC107812402 LOC107796322 GCT LOC100781873 LOC100782017 LOC103829787 LOC103871044 LOC100263945 LOC18094284 LOC7461357 LOC11437356 LOC107928302 LOC107909117 LOC106345752 LOC106410568 LOC102621056 LOC4338949 LOC100279985 LOC123046975 LOC123087461 LOC123395232 LOC123428029 LOC8065361 LOC100834674
Function* mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13-like RNA polymerase II transcription mediator mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 uncharacterized LOC100279985 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13-like mediator of RNA polymerase II transcription subunit 13-like mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 3
nta03250 Viral life cycle - HIV-1 3
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath04136 Autophagy - other 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra04136 Autophagy - other 2
bra04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 5
ghi03250 Viral life cycle - HIV-1 5
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101261015 102578156 107812402 107796322 841978 100781873 100782017 103829787 103871044 100263945 18094284 7461357 11437356 107928302 107909117 106345752 106410568 102621056 4338949 100279985 123046975 123087461 123395232 123428029 8065361 100834674
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