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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106345752   mediator of RNA polymerase II transcription subunit 13 
 ath-u.5   GCT   RNA polymerase II transcription mediator 
 gma-u.5   100782017   mediator of RNA polymerase II transcription subunit 13 
 gma-u.5   100781873   mediator of RNA polymerase II transcription subunit 13 
 vvi-u.5   100263945   mediator of RNA polymerase II transcription subunit 13 
 ppo-u.5   18094284   mediator of RNA polymerase II transcription subunit 13 
 ppo-u.5   7461357   mediator of RNA polymerase II transcription subunit 13 
 mtr-u.5   11437356   mediator of RNA polymerase II transcription subunit 13 
 sly-u.5   101261015   mediator of RNA polymerase II transcription subunit 13 
 osa-u.5   4338949   mediator of RNA polymerase II transcription subunit 13 
 zma-u.5   100279985   uncharacterized LOC100279985 

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Top 50 coexpressed genes to 106345752 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106345752 (bna-r.1 coexpression data)

CoexMap"106345752"


bnaLOC106345752 | Entrez gene ID : 106345752    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1371 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (98 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (379 genes)  IEA  
Protein XP_048637689.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto 1,  mito 1,  pero 1,  cysk 1,  cyto_pero 1  (predict for XP_048637689.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_048637689.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106345752

.
ath-u.5
for
GCT

.
gma-u.5
for
100782017

.
gma-u.5
for
100781873

.
vvi-u.5
for
100263945

.
ppo-u.5
for
18094284

.
ppo-u.5
for
7461357

.
mtr-u.5
for
11437356

.
sly-u.5
for
101261015

.
osa-u.5
for
4338949

.
zma-u.5
for
100279985

.


Ortholog ID: 6424
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol GCT LOC100781873 LOC100782017 LOC101261015 LOC4338949 LOC100279985 LOC103829787 LOC103871044 LOC100263945 LOC18094284 LOC7461357 LOC11437356 LOC123046975 LOC123087461 LOC123395232 LOC123428029 LOC107928302 LOC107909117 LOC106345752 LOC106410568 LOC8065361 LOC102578156 LOC102621056 LOC100834674 LOC107812402 LOC107796322
Function* RNA polymerase II transcription mediator mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 uncharacterized LOC100279985 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13-like mediator of RNA polymerase II transcription subunit 13-like mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13 mediator of RNA polymerase II transcription subunit 13-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath04136 Autophagy - other 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra04136 Autophagy - other 2
bra04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 5
ghi03250 Viral life cycle - HIV-1 5
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 3
nta03250 Viral life cycle - HIV-1 3
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841978 100781873 100782017 101261015 4338949 100279985 103829787 103871044 100263945 18094284 7461357 11437356 123046975 123087461 123395232 123428029 107928302 107909117 106345752 106410568 8065361 102578156 102621056 100834674 107812402 107796322
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