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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101261490   rRNA 2'-O-methyltransferase fibrillarin 2-like 
 sly-r.6   101261490   rRNA 2'-O-methyltransferase fibrillarin 2-like 
 sly-m.5   101261490   rRNA 2'-O-methyltransferase fibrillarin 2-like 
 sot-r.1   102584645   mediator of RNA polymerase II transcription subunit 36a-like 
 nta-r.1   107779020   rRNA 2'-O-methyltransferase fibrillarin 1-like 
 nta-r.1   107768907   mediator of RNA polymerase II transcription subunit 36a-like 
 ath-u.5   FIB2   fibrillarin 2 
 ath-u.5   FIB1   fibrillarin 1 
 gma-u.5   100788688   rRNA 2'-O-methyltransferase fibrillarin 2 
 gma-u.5   100789137   rRNA 2'-O-methyltransferase fibrillarin 2 
 gma-u.5   100797625   rRNA 2'-O-methyltransferase fibrillarin 2 
 bra-r.6   103834862   mediator of RNA polymerase II transcription subunit 36a 
 bra-r.6   103863368   probable mediator of RNA polymerase II transcription subunit 36b 
 vvi-u.5   100266267   rRNA 2'-O-methyltransferase fibrillarin 1 
 ppo-u.5   7474066   rRNA 2'-O-methyltransferase fibrillarin 1 
 ppo-u.5   7484920   rRNA 2'-O-methyltransferase fibrillarin 1 
 mtr-u.5   25496400   rRNA 2'-O-methyltransferase fibrillarin 1 
 mtr-u.5   11440720   rRNA 2'-O-methyltransferase fibrillarin 1 
 ghi-r.1   121209584   rRNA 2'-O-methyltransferase fibrillarin 2 
 ghi-r.1   107951276   rRNA 2'-O-methyltransferase fibrillarin 2 
 ghi-r.1   107917830   rRNA 2'-O-methyltransferase fibrillarin 1 
 bna-r.1   106442926   rRNA 2'-O-methyltransferase fibrillarin 2-like 
 bna-r.1   106409785   rRNA 2'-O-methyltransferase fibrillarin 1 
 bna-r.1   106347100   rRNA 2'-O-methyltransferase fibrillarin 2 
 cit-r.1   102629115   rRNA 2'-O-methyltransferase fibrillarin 1-like 
 osa-u.5   9266224   rRNA 2'-O-methyltransferase fibrillarin 1 
 osa-u.5   4331181   rRNA 2'-O-methyltransferase fibrillarin 2 
 zma-u.5   100282167   uncharacterized LOC100282167 
 tae-r.2   123165498   rRNA 2'-O-methyltransferase fibrillarin 1 
 tae-r.2   123159877   rRNA 2'-O-methyltransferase fibrillarin 1 
 tae-r.2   123129055   rRNA 2'-O-methyltransferase fibrillarin 1 
 hvu-r.1   123404338   rRNA 2'-O-methyltransferase fibrillarin 1-like 
 hvu-r.1   123407385   rRNA 2'-O-methyltransferase fibrillarin 1-like 
 sbi-r.1   8065563   probable mediator of RNA polymerase II transcription subunit 36b 
 sbi-r.1   8059696   probable mediator of RNA polymerase II transcription subunit 36b 
 bdi-r.1   100840221   probable mediator of RNA polymerase II transcription subunit 36b 
 bdi-r.1   100846789   probable mediator of RNA polymerase II transcription subunit 36b 
 cre-r.1   CHLRE_02g077300v5   uncharacterized protein 

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Top 50 coexpressed genes to 101261490 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101261490 (sly-u.5 coexpression data)

CoexMap"101261490"


slyLOC101261490 | Entrez gene ID : 101261490      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 3 2 1 2 2 3 3 1 2 1 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03008 [list] [network] Ribosome biogenesis in eukaryotes (5923 genes)
GO BP
GO:0000494 [list] [network] box C/D sno(s)RNA 3'-end processing  (1 genes)  IEA  
GO:0031167 [list] [network] rRNA methylation  (23 genes)  IEA  
GO CC
GO:0031428 [list] [network] box C/D methylation guide snoRNP complex  (6 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (41 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (194 genes)  IEA  
GO MF
GO:1990259 [list] [network] histone H2AQ104 methyltransferase activity  (1 genes)  IEA  
GO:0008649 [list] [network] rRNA methyltransferase activity  (19 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_004234430.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  nucl 1,  pero 1  (predict for XP_004234430.1)
Subcellular
localization
TargetP
mito 6,  other 6  (predict for XP_004234430.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101261490
sly-r.6
for
101261490
sly-m.5
for
101261490
sot-r.1
for
102584645
nta-r.1
for
107779020
nta-r.1
for
107768907
ath-u.5
for
FIB2
ath-u.5
for
FIB1
gma-u.5
for
100788688
gma-u.5
for
100789137
gma-u.5
for
100797625
bra-r.6
for
103834862
bra-r.6
for
103863368
vvi-u.5
for
100266267
ppo-u.5
for
7474066
ppo-u.5
for
7484920
mtr-u.5
for
25496400
mtr-u.5
for
11440720
ghi-r.1
for
121209584
ghi-r.1
for
107951276
ghi-r.1
for
107917830
bna-r.1
for
106442926
bna-r.1
for
106409785
bna-r.1
for
106347100
cit-r.1
for
102629115
osa-u.5
for
9266224
osa-u.5
for
4331181
zma-u.5
for
100282167
tae-r.2
for
123165498
tae-r.2
for
123159877
tae-r.2
for
123129055
hvu-r.1
for
123404338
hvu-r.1
for
123407385
sbi-r.1
for
8065563
sbi-r.1
for
8059696
bdi-r.1
for
100840221
bdi-r.1
for
100846789
cre-r.1
for
CHLRE_02g077300v5


Ortholog ID: 3718
Species sly sot nta nta ath ath gma gma bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit osa osa zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC101261490 LOC102584645 LOC107779020 LOC107768907 FIB2 FIB1 LOC100789137 LOC100797625 LOC103863368 LOC103861582 LOC100266267 LOC7474066 LOC7484920 LOC25496400 LOC11440720 LOC107917830 LOC107908112 LOC107904604 LOC106409785 LOC106426404 LOC106444625 LOC102629115 LOC9266224 LOC4331181 LOC100282167 LOC123165498 LOC123159877 LOC123139921 LOC123404338 LOC123407385 LOC8065563 LOC8059696 LOC100840221 LOC100846789 CHLRE_02g077300v5
Function* rRNA 2'-O-methyltransferase fibrillarin 2-like mediator of RNA polymerase II transcription subunit 36a-like rRNA 2'-O-methyltransferase fibrillarin 1-like mediator of RNA polymerase II transcription subunit 36a-like fibrillarin 2 fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 2 rRNA 2'-O-methyltransferase fibrillarin 2 probable mediator of RNA polymerase II transcription subunit 36b mediator of RNA polymerase II transcription subunit 36a rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 2 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 2 rRNA 2'-O-methyltransferase fibrillarin 2 rRNA 2'-O-methyltransferase fibrillarin 1-like rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 2 uncharacterized LOC100282167 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1-like rRNA 2'-O-methyltransferase fibrillarin 1-like probable mediator of RNA polymerase II transcription subunit 36b probable mediator of RNA polymerase II transcription subunit 36b probable mediator of RNA polymerase II transcription subunit 36b probable mediator of RNA polymerase II transcription subunit 36b uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03008 Ribosome biogenesis in eukaryotes 5
nta03082 ATP-dependent chromatin remodeling 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta03008 Ribosome biogenesis in eukaryotes 7
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03008 Ribosome biogenesis in eukaryotes 6
gma00240 Pyrimidine metabolism 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 10
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi04626 Plant-pathogen interaction 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 12
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 13
bna03018 RNA degradation 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 12
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03008 Ribosome biogenesis in eukaryotes 3
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 8
cre00230 Purine metabolism 2
cre01232 Nucleotide metabolism 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101261490 102584645 107779020 107768907 828668 835323 100789137 100797625 103863368 103861582 100266267 7474066 7484920 25496400 11440720 107917830 107908112 107904604 106409785 106426404 106444625 102629115 9266224 4331181 100282167 123165498 123159877 123139921 123404338 123407385 8065563 8059696 100840221 100846789 5727229
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