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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106409785   rRNA 2'-O-methyltransferase fibrillarin 1 
 ath-u.5   FIB2   fibrillarin 2 
 ath-u.5   FIB1   fibrillarin 1 
 gma-u.5   100788688   rRNA 2'-O-methyltransferase fibrillarin 2 
 gma-u.5   100789137   rRNA 2'-O-methyltransferase fibrillarin 2 
 gma-u.5   100797625   rRNA 2'-O-methyltransferase fibrillarin 2 
 vvi-u.5   100266267   rRNA 2'-O-methyltransferase fibrillarin 1 
 ppo-u.5   7484920   rRNA 2'-O-methyltransferase fibrillarin 1 
 ppo-u.5   7474066   rRNA 2'-O-methyltransferase fibrillarin 1 
 mtr-u.5   11440720   rRNA 2'-O-methyltransferase fibrillarin 1 
 mtr-u.5   25496400   rRNA 2'-O-methyltransferase fibrillarin 1 
 sly-u.5   101261490   rRNA 2'-O-methyltransferase fibrillarin 2-like 
 osa-u.5   4331181   rRNA 2'-O-methyltransferase fibrillarin 2 
 osa-u.5   9266224   rRNA 2'-O-methyltransferase fibrillarin 1 
 zma-u.5   100282167   uncharacterized LOC100282167 

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Top 50 coexpressed genes to 106409785 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106409785 (bna-r.1 coexpression data)

CoexMap"106409785"


bnaLOC106409785 | Entrez gene ID : 106409785    
Species bna ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre nta bdi bra
Paralog 1 2 3 1 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03008 [list] [network] Ribosome biogenesis in eukaryotes (6477 genes)
GO BP
GO:0000494 [list] [network] box C/D sno(s)RNA 3'-end processing  (10 genes)  IEA  
GO:0031167 [list] [network] rRNA methylation  (78 genes)  IEA  
GO CC
GO:0031428 [list] [network] box C/D methylation guide snoRNP complex  (36 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (155 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO MF
GO:1990259 [list] [network] histone H2AQ104 methyltransferase activity  (10 genes)  IEA  
GO:0008649 [list] [network] rRNA methyltransferase activity  (59 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013705800.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  pero 1  (predict for XP_013705800.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_013705800.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106409785

.
ath-u.5
for
FIB2

.
ath-u.5
for
FIB1

.
gma-u.5
for
100788688

.
gma-u.5
for
100789137

.
gma-u.5
for
100797625

.
vvi-u.5
for
100266267

.
ppo-u.5
for
7484920

.
ppo-u.5
for
7474066

.
mtr-u.5
for
11440720

.
mtr-u.5
for
25496400

.
sly-u.5
for
101261490

.
osa-u.5
for
4331181

.
osa-u.5
for
9266224

.
zma-u.5
for
100282167

.


Ortholog ID: 3718
Species ath ath gma sly osa osa zma bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol FIB1 FIB2 LOC100789137 LOC101261490 LOC9266224 LOC4331181 LOC100282167 LOC103863368 LOC100266267 LOC7474066 LOC25496400 LOC11440720 LOC123165498 LOC123159877 LOC123407385 LOC123404338 LOC107917830 LOC107908112 LOC106426404 LOC106409785 CHLRE_02g077300v5 LOC8065563 LOC8059696 LOC102584645 LOC102629115 LOC100840221 LOC100846789 LOC107768907 LOC107779020
Function* fibrillarin 1 fibrillarin 2 rRNA 2'-O-methyltransferase fibrillarin 2 rRNA 2'-O-methyltransferase fibrillarin 2-like rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 2 uncharacterized LOC100282167 probable mediator of RNA polymerase II transcription subunit 36b rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1-like rRNA 2'-O-methyltransferase fibrillarin 1-like rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 1 rRNA 2'-O-methyltransferase fibrillarin 2 rRNA 2'-O-methyltransferase fibrillarin 1 uncharacterized protein probable mediator of RNA polymerase II transcription subunit 36b probable mediator of RNA polymerase II transcription subunit 36b mediator of RNA polymerase II transcription subunit 36a-like rRNA 2'-O-methyltransferase fibrillarin 1-like probable mediator of RNA polymerase II transcription subunit 36b probable mediator of RNA polymerase II transcription subunit 36b mediator of RNA polymerase II transcription subunit 36a-like rRNA 2'-O-methyltransferase fibrillarin 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03008 Ribosome biogenesis in eukaryotes 6
gma00240 Pyrimidine metabolism 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 13
bna03018 RNA degradation 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 12
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 8
cre00230 Purine metabolism 2
cre01232 Nucleotide metabolism 2
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta03008 Ribosome biogenesis in eukaryotes 7
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03008 Ribosome biogenesis in eukaryotes 5
nta03082 ATP-dependent chromatin remodeling 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835323 828668 100789137 101261490 9266224 4331181 100282167 103863368 100266267 7474066 25496400 11440720 123165498 123159877 123407385 123404338 107917830 107908112 106426404 106409785 5727229 8065563 8059696 102584645 102629115 100840221 100846789 107768907 107779020
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