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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101261958   armadillo repeat-containing protein LFR 
 sly-r.6   101261958   armadillo repeat-containing protein LFR 
 sly-m.5   101261958   armadillo repeat-containing protein LFR 
 sly-u.5   101257736   armadillo repeat-containing protein LFR 
 sot-r.1   102594360   armadillo repeat-containing protein LFR-like 
 sot-r.1   102582931   armadillo repeat-containing protein LFR-like 
 nta-r.1   107804220   armadillo repeat-containing protein LFR-like 
 nta-r.1   107787622   armadillo repeat-containing protein LFR 
 nta-r.1   107761671   armadillo repeat-containing protein LFR 
 ath-u.5   LFR   ARM repeat superfamily protein 
 gma-u.5   100814807   armadillo repeat-containing protein LFR 
 gma-u.5   100790539   armadillo repeat-containing protein LFR 
 bra-r.6   103868950   armadillo repeat-containing protein LFR 
 vvi-u.5   100240806   armadillo repeat-containing protein LFR 
 ppo-u.5   7467516   armadillo repeat-containing protein LFR 
 mtr-u.5   25482934   armadillo repeat-containing protein LFR 
 ghi-r.1   107914994   armadillo repeat-containing protein LFR 
 ghi-r.1   107910616   armadillo repeat-containing protein LFR 
 bna-r.1   106401808   armadillo repeat-containing protein LFR 
 bna-r.1   106451783   armadillo repeat-containing protein LFR 
 cit-r.1   102608380   armadillo repeat-containing protein LFR 
 osa-u.5   9271563   armadillo repeat-containing protein LFR-like 
 zma-u.5   100277110   uncharacterized LOC100277110 
 tae-r.2   123144673   armadillo repeat-containing protein LFR 
 tae-r.2   123137301   armadillo repeat-containing protein LFR 
 tae-r.2   123127555   armadillo repeat-containing protein LFR 
 hvu-r.1   123402049   armadillo repeat-containing protein LFR 
 sbi-r.1   8055439   armadillo repeat-containing protein LFR 
 bdi-r.1   100822874   armadillo repeat-containing protein LFR 

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Top 50 coexpressed genes to 101261958 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101261958 (sly-u.5 coexpression data)

CoexMap"101261958"


slyLOC101261958 | Entrez gene ID : 101261958      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 2 3 1 2 1 1 1 1 2 2 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (160 genes)  IEA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (243 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (493 genes)  IEA  
GO CC
GO:0035060 [list] [network] brahma complex  (2 genes)  IEA  
GO:0016514 [list] [network] SWI/SNF complex  (6 genes)  IEA  
GO:0005654 [list] [network] nucleoplasm  (193 genes)  IEA  
GO MF
GO:0031491 [list] [network] nucleosome binding  (36 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_010326699.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_010326699.2)
Subcellular
localization
TargetP
chlo 5  (predict for XP_010326699.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101261958
sly-r.6
for
101261958
sly-m.5
for
101261958
sly-u.5
for
101257736
sot-r.1
for
102594360
sot-r.1
for
102582931
nta-r.1
for
107804220
nta-r.1
for
107787622
nta-r.1
for
107761671
ath-u.5
for
LFR
gma-u.5
for
100814807
gma-u.5
for
100790539
bra-r.6
for
103868950
vvi-u.5
for
100240806
ppo-u.5
for
7467516
mtr-u.5
for
25482934
ghi-r.1
for
107914994
ghi-r.1
for
107910616
bna-r.1
for
106401808
bna-r.1
for
106451783
cit-r.1
for
102608380
osa-u.5
for
9271563
zma-u.5
for
100277110
tae-r.2
for
123144673
tae-r.2
for
123137301
tae-r.2
for
123127555
hvu-r.1
for
123402049
sbi-r.1
for
8055439
bdi-r.1
for
100822874


Ortholog ID: 8479
Species sly sly sot sot nta nta nta ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC101261958 LOC101257736 LOC102594360 LOC102582931 LOC107804220 LOC107787622 LOC107761671 LFR LOC100814807 LOC100790539 LOC103868950 LOC100240806 LOC7467516 LOC25482934 LOC107914994 LOC107910616 LOC106401808 LOC106451783 LOC102608380 LOC9271563 LOC100277110 LOC123144673 LOC123137301 LOC123127555 LOC123402049 LOC8055439 LOC100822874
Function* armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR-like armadillo repeat-containing protein LFR-like armadillo repeat-containing protein LFR-like armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR ARM repeat superfamily protein armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR-like uncharacterized LOC100277110 armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR armadillo repeat-containing protein LFR
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta00030 Pentose phosphate pathway 2
nta01200 Carbon metabolism 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta03083 Polycomb repressive complex 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta03083 Polycomb repressive complex 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03040 Spliceosome 2
gma03008 Ribosome biogenesis in eukaryotes 2
gma03013 Nucleocytoplasmic transport 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
bra04136 Autophagy - other 2
bra04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03040 Spliceosome 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi04120 Ubiquitin mediated proteolysis 4
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04146 Peroxisome 3
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101261958 101257736 102594360 102582931 107804220 107787622 107761671 821873 100814807 100790539 103868950 100240806 7467516 25482934 107914994 107910616 106401808 106451783 102608380 9271563 100277110 123144673 123137301 123127555 123402049 8055439 100822874
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