Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262199   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 sly-r.6   101262199   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 ath-u.5   PTAC2   plastid transcriptionally active 2 
 gma-u.5   100801366   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 gma-u.5   100797731   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 vvi-u.5   100251853   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 ppo-u.5   7462533   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 mtr-u.5   25493780   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 osa-u.5   4334623   pentatricopeptide repeat-containing protein At1g74850, chloroplastic 
 zma-u.5   103633614   pentatricopeptide repeat-containing protein At1g74850, chloroplastic-like 

close


Top 50 coexpressed genes to 101262199 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 101262199 (sly-u.5 coexpression data)

CoexMap"101262199"


slyLOC101262199 | Entrez gene ID : 101262199    
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004236160.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_004236160.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_004236160.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262199

.
sly-r.6
for
101262199

.
ath-u.5
for
PTAC2

.
gma-u.5
for
100801366

.
gma-u.5
for
100797731

.
vvi-u.5
for
100251853

.
ppo-u.5
for
7462533

.
mtr-u.5
for
25493780

.
osa-u.5
for
4334623

.
zma-u.5
for
103633614

.


Ortholog ID: 11132
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol PTAC2 LOC100797731 LOC100801366 LOC101262199 LOC4334623 LOC103633614 LOC103831944 LOC100251853 LOC7462533 LOC25493780 LOC123114053 LOC123123542 LOC123453103 LOC107941546 LOC107954105 LOC106404446 LOC106354541 LOC8057352 LOC102602805 LOC102619593 LOC100830599 LOC107789959 LOC107803026
Function* plastid transcriptionally active 2 pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic-like pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic pentatricopeptide repeat-containing protein At1g74850, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 2
tae00270 Cysteine and methionine metabolism 2
tae01200 Carbon metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04144 Endocytosis 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04144 Endocytosis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843824 100797731 100801366 101262199 4334623 103633614 103831944 100251853 7462533 25493780 123114053 123123542 123453103 107941546 107954105 106404446 106354541 8057352 102602805 102619593 100830599 107789959 107803026
The preparation time of this page was 0.1 [sec].