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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262406   nuclear pore complex protein NUP93A 
 sly-r.6   101262406   nuclear pore complex protein NUP93A 
 sot-r.1   102591270   nuclear pore complex protein NUP93A-like 
 sot-r.1   102579640   nuclear pore complex protein NUP93B-like 
 nta-r.1   107832412   nuclear pore complex protein NUP93A 
 nta-r.1   107795313   nuclear pore complex protein NUP93A 
 ath-u.5   AT2G41620   Nucleoporin interacting component (Nup93/Nic96-like) family protein 
 ath-u.5   AT3G57350   Nucleoporin interacting component (Nup93/Nic96-like) family protein 
 gma-u.5   100782831   nuclear pore complex protein NUP93A 
 gma-u.5   100777660   nuclear pore complex protein NUP93A 
 bra-r.6   103865894   nuclear pore complex protein NUP93A 
 bra-r.6   103841640   nuclear pore complex protein NUP93B 
 vvi-u.5   100252000   nuclear pore complex protein NUP93A 
 ppo-u.5   7485204   nuclear pore complex protein NUP93A 
 ppo-u.5   7457766   nuclear pore complex protein NUP93A 
 mtr-u.5   11427202   nuclear pore complex protein NUP93A 
 ghi-r.1   107925888   nuclear pore complex protein NUP93A 
 ghi-r.1   107940523   nuclear pore complex protein NUP93A 
 bna-r.1   125594535   nuclear pore complex protein NUP93B-like 
 bna-r.1   106451577   nuclear pore complex protein NUP93B 
 bna-r.1   106447555   nuclear pore complex protein NUP93A-like 
 cit-r.1   102630722   nuclear pore complex protein NUP93A 
 osa-u.5   4332834   nuclear pore complex protein NUP93A 
 zma-u.5   103634826   nuclear pore complex protein NUP93A 
 tae-r.2   123085866   nuclear pore complex protein NUP93A 
 tae-r.2   123097273   nuclear pore complex protein NUP93A 
 tae-r.2   123091961   nuclear pore complex protein NUP93A 
 hvu-r.1   123399829   nuclear pore complex protein NUP93A-like 
 sbi-r.1   8082655   nuclear pore complex protein NUP93A 
 bdi-r.1   100836281   nuclear pore complex protein NUP93A 
 cre-r.1   CHLRE_17g717800v5   uncharacterized protein 

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Top 50 coexpressed genes to 101262406 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101262406 (sly-u.5 coexpression data)

CoexMap"101262406"


slyLOC101262406 | Entrez gene ID : 101262406      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 2 2 2 2 2 1 2 1 2 3 1 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03013 [list] [network] Nucleocytoplasmic transport (106 genes)
GO BP
GO:0016973 [list] [network] poly(A)+ mRNA export from nucleus  (11 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (46 genes)  IEA  
GO CC
GO:0005643 [list] [network] nuclear pore  (46 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IEA  
Protein XP_004236591.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cyto_pero 3,  nucl 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  golg 1,  nucl_plas 1,  golg_plas 1,  E.R._vacu 1,  E.R._plas 1,  mito_plas 1  (predict for XP_004236591.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_004236591.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262406
sly-r.6
for
101262406
sot-r.1
for
102591270
sot-r.1
for
102579640
nta-r.1
for
107832412
nta-r.1
for
107795313
ath-u.5
for
AT2G41620
ath-u.5
for
AT3G57350
gma-u.5
for
100782831
gma-u.5
for
100777660
bra-r.6
for
103865894
bra-r.6
for
103841640
vvi-u.5
for
100252000
ppo-u.5
for
7485204
ppo-u.5
for
7457766
mtr-u.5
for
11427202
ghi-r.1
for
107925888
ghi-r.1
for
107940523
bna-r.1
for
125594535
bna-r.1
for
106451577
bna-r.1
for
106447555
cit-r.1
for
102630722
osa-u.5
for
4332834
zma-u.5
for
103634826
tae-r.2
for
123085866
tae-r.2
for
123097273
tae-r.2
for
123091961
hvu-r.1
for
123399829
sbi-r.1
for
8082655
bdi-r.1
for
100836281
cre-r.1
for
CHLRE_17g717800v5


Ortholog ID: 6844
Species sly sot sot nta nta ath ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC101262406 LOC102591270 LOC102579640 LOC107832412 LOC107795313 AT2G41620 AT3G57350 LOC100782831 LOC100777660 LOC103865894 LOC103841640 LOC100252000 LOC7485204 LOC7457766 LOC11427202 LOC107925888 LOC107940523 LOC106451577 LOC106415407 LOC106391673 LOC102630722 LOC4332834 LOC103634826 LOC123085866 LOC123097273 LOC123091961 LOC123399829 LOC8082655 LOC100836281 CHLRE_17g717800v5
Function* nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A-like nuclear pore complex protein NUP93B-like nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A Nucleoporin interacting component (Nup93/Nic96-like) family protein Nucleoporin interacting component (Nup93/Nic96-like) family protein nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93B nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93B nuclear pore complex protein NUP93B-like nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A-like nuclear pore complex protein NUP93A nuclear pore complex protein NUP93A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 Nucleocytoplasmic transport 6
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 5
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03015 mRNA surveillance pathway 2
sot01240 Biosynthesis of cofactors 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03013 Nucleocytoplasmic transport 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 6
nta00620 Pyruvate metabolism 6
nta01200 Carbon metabolism 6
nta01230 Biosynthesis of amino acids 6
nta04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 6
nta00620 Pyruvate metabolism 6
nta01200 Carbon metabolism 6
nta01230 Biosynthesis of amino acids 6
nta04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 5
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03040 Spliceosome 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 8
ghi03015 mRNA surveillance pathway 6
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi03015 mRNA surveillance pathway 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 8
bna03020 RNA polymerase 6
bna03013 Nucleocytoplasmic transport 3
bna00020 Citrate cycle (TCA cycle) 2
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
bna04120 Ubiquitin mediated proteolysis 4
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 11
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03040 Spliceosome 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03040 Spliceosome 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 5
sbi03013 Nucleocytoplasmic transport 4
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262406 102591270 102579640 107832412 107795313 818760 824902 100782831 100777660 103865894 103841640 100252000 7485204 7457766 11427202 107925888 107940523 106451577 106415407 106391673 102630722 4332834 103634826 123085866 123097273 123091961 123399829 8082655 100836281 5729287
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