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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262866   two-component response regulator-like APRR5 
 sly-r.6   101262866   two-component response regulator-like APRR5 
 sly-u.5   101250283   two-component response regulator-like APRR5 
 sot-r.1   102589008   two-component response regulator-like APRR5 
 sot-r.1   102603187   two-component response regulator-like APRR5 
 nta-r.1   107780646   two-component response regulator-like APRR5 
 nta-r.1   107802108   two-component response regulator-like APRR5 
 nta-r.1   107801908   two-component response regulator-like APRR9 
 ath-u.5   PRR9   pseudo-response regulator 9 
 ath-u.5   PRR5   two-component response regulator-like protein 
 gma-u.5   100791698   two-component response regulator-like APRR9 
 gma-u.5   100777119   two-component response regulator-like PRR95 
 gma-u.5   100802674   two-component response regulator-like PRR95 
 bra-r.6   103866432   two-component response regulator-like APRR9 
 bra-r.6   103837062   two-component response regulator-like APRR5 
 bra-r.6   103854859   two-component response regulator-like APRR5 
 vvi-u.5   100253885   two-component response regulator-like APRR9 
 vvi-u.5   100853219   two-component response regulator-like APRR5 
 ppo-u.5   7464491   two-component response regulator-like APRR5 
 ppo-u.5   7485182   two-component response regulator-like APRR5 
 ppo-u.5   7486808   two-component response regulator-like APRR9 
 mtr-u.5   11437345   two-component response regulator-like APRR9 
 mtr-u.5   25500611   two-component response regulator-like APRR5 
 mtr-u.5   11426713   two-component response regulator-like APRR9 
 ghi-r.1   107947190   two-component response regulator-like APRR5 
 ghi-r.1   107904227   two-component response regulator-like APRR5 
 ghi-r.1   107904548   two-component response regulator-like APRR5 
 bna-r.1   125608397   two-component response regulator-like APRR9 
 bna-r.1   106450475   two-component response regulator-like APRR9 
 bna-r.1   106348478   two-component response regulator-like APRR5 
 cit-r.1   102622921   two-component response regulator-like APRR3 
 cit-r.1   102631246   two-component response regulator-like APRR5 
 osa-u.5   4347674   two-component response regulator-like PRR95 
 zma-u.5   100273598   Two-component response regulator-like APRR9 
 zma-u.5   100285170   two-component response regulator-like PRR95 
 tae-r.2   123122302   two-component response regulator-like PRR95 
 tae-r.2   123112819   two-component response regulator-like PRR95 
 tae-r.2   123104544   two-component response regulator-like PRR95 
 hvu-r.1   123400068   two-component response regulator-like PRR95 
 sbi-r.1   110432809   two-component response regulator-like PRR95 
 bdi-r.1   100823927   two-component response regulator-like PRR95 

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Top 50 coexpressed genes to 101262866 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101262866 (sly-u.5 coexpression data)

CoexMap"101262866"


slyLOC101262866 | Entrez gene ID : 101262866      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 2 3 2 3 3 2 3 3 3 3 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04712 [list] [network] Circadian rhythm - plant (47 genes)
GO BP
GO:0009909 [list] [network] regulation of flower development  (22 genes)  IEA  
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (32 genes)  IEA  
GO:0000160 [list] [network] phosphorelay signal transduction system  (106 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1125 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004248421.1 [sequence] [blastp]
XP_010327246.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_004248421.1)
nucl 10  (predict for XP_010327246.1)
Subcellular
localization
TargetP
other 9  (predict for XP_004248421.1)
other 4,  chlo 4  (predict for XP_010327246.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262866
sly-r.6
for
101262866
sly-u.5
for
101250283
sot-r.1
for
102589008
sot-r.1
for
102603187
nta-r.1
for
107780646
nta-r.1
for
107802108
nta-r.1
for
107801908
ath-u.5
for
PRR9
ath-u.5
for
PRR5
gma-u.5
for
100791698
gma-u.5
for
100777119
gma-u.5
for
100802674
bra-r.6
for
103866432
bra-r.6
for
103837062
bra-r.6
for
103854859
vvi-u.5
for
100253885
vvi-u.5
for
100853219
ppo-u.5
for
7464491
ppo-u.5
for
7485182
ppo-u.5
for
7486808
mtr-u.5
for
11437345
mtr-u.5
for
25500611
mtr-u.5
for
11426713
ghi-r.1
for
107947190
ghi-r.1
for
107904227
ghi-r.1
for
107904548
bna-r.1
for
125608397
bna-r.1
for
106450475
bna-r.1
for
106348478
cit-r.1
for
102622921
cit-r.1
for
102631246
osa-u.5
for
4347674
zma-u.5
for
100273598
zma-u.5
for
100285170
tae-r.2
for
123122302
tae-r.2
for
123112819
tae-r.2
for
123104544
hvu-r.1
for
123400068
sbi-r.1
for
110432809
bdi-r.1
for
100823927


Ortholog ID: 2546
Species sly sly sot sot nta nta nta ath ath gma gma gma bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa zma zma tae tae tae hvu sbi bdi
Symbol LOC101262866 LOC101250283 LOC102589008 LOC102603187 LOC107780646 LOC107801908 LOC107806932 PRR9 PRR5 LOC100802674 LOC100809490 LOC100779346 LOC103866432 LOC103854859 LOC103874318 LOC100253885 LOC100853219 LOC7464491 LOC7486808 LOC7487745 LOC11437345 LOC25500611 LOC11426713 LOC107904548 LOC107922980 LOC107938086 LOC106450475 LOC106366007 LOC106382607 LOC102622921 LOC102631246 LOC4347674 LOC100273598 LOC100285170 LOC123122302 LOC123112819 LOC123104544 LOC123400068 LOC110432809 LOC100823927
Function* two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like APRR9 pseudo-response regulator 9 two-component response regulator-like protein two-component response regulator-like PRR95 two-component response regulator-like PRR95 two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR3 two-component response regulator-like APRR5 two-component response regulator-like PRR95 Two-component response regulator-like APRR9 two-component response regulator-like PRR95 two-component response regulator-like PRR95 two-component response regulator-like PRR95 two-component response regulator-like PRR95 two-component response regulator-like PRR95 two-component response regulator-like PRR95 two-component response regulator-like PRR95
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 5
nta00510 N-Glycan biosynthesis 2
nta00330 Arginine and proline metabolism 2
nta00410 beta-Alanine metabolism 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 4
sbi00730 Thiamine metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262866 101250283 102589008 102603187 107780646 107801908 107806932 819292 832518 100802674 100809490 100779346 103866432 103854859 103874318 100253885 100853219 7464491 7486808 7487745 11437345 25500611 11426713 107904548 107922980 107938086 106450475 106366007 106382607 102622921 102631246 4347674 100273598 100285170 123122302 123112819 123104544 123400068 110432809 100823927
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