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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107947190   two-component response regulator-like APRR5 
 ghi-r.1   107938086   two-component response regulator-like APRR5 
 ghi-r.1   107929466   two-component response regulator-like APRR5 
 ghi-r.1   107904227   two-component response regulator-like APRR5 
 ath-u.5   PRR9   pseudo-response regulator 9 
 ath-u.5   PRR5   two-component response regulator-like protein 
 bra-r.6   103874318   two-component response regulator-like APRR5 
 bra-r.6   103866432   two-component response regulator-like APRR9 
 bra-r.6   103866306   two-component response regulator-like APRR9 
 bna-r.1   125608397   two-component response regulator-like APRR9 
 bna-r.1   106450475   two-component response regulator-like APRR9 
 bna-r.1   106428471   two-component response regulator-like APRR5 
 cit-r.1   102631246   two-component response regulator-like APRR5 
 cit-r.1   102622921   two-component response regulator-like APRR3 
 gma-u.5   100791698   two-component response regulator-like APRR9 
 gma-u.5   100784383   two-component response regulator-like APRR9 
 gma-u.5   100809490   two-component response regulator-like PRR95 
 vvi-u.5   100853219   two-component response regulator-like APRR5 
 vvi-u.5   100253885   two-component response regulator-like APRR9 
 ppo-u.5   7486808   two-component response regulator-like APRR9 
 ppo-u.5   7464491   two-component response regulator-like APRR5 
 ppo-u.5   7485182   two-component response regulator-like APRR5 
 mtr-u.5   11426713   two-component response regulator-like APRR9 
 mtr-u.5   11437345   two-component response regulator-like APRR9 
 mtr-u.5   25500611   two-component response regulator-like APRR5 
 sly-u.5   101262866   two-component response regulator-like APRR5 
 sly-u.5   101250283   two-component response regulator-like APRR5 
 sot-r.1   102603187   two-component response regulator-like APRR5 
 sot-r.1   102589008   two-component response regulator-like APRR5 
 nta-r.1   107801908   two-component response regulator-like APRR9 
 nta-r.1   107780646   two-component response regulator-like APRR5 
 nta-r.1   107806932   two-component response regulator-like APRR9 
 osa-u.5   4347674   two-component response regulator-like PRR95 
 zma-u.5   100273598   Two-component response regulator-like APRR9 
 zma-u.5   100285170   two-component response regulator-like PRR95 
 tae-r.2   123104544   two-component response regulator-like PRR95 
 tae-r.2   123112819   two-component response regulator-like PRR95 
 tae-r.2   123122302   two-component response regulator-like PRR95 
 hvu-r.1   123400068   two-component response regulator-like PRR95 
 sbi-r.1   110432809   two-component response regulator-like PRR95 
 bdi-r.1   100823927   two-component response regulator-like PRR95 

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Top 50 coexpressed genes to 107947190 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107947190 (ghi-r.1 coexpression data)

CoexMap"107947190"


ghiLOC107947190 | Entrez gene ID : 107947190    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 3 2 3 3 2 2 3 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04712 [list] [network] Circadian rhythm - plant (130 genes)
GO BP
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (133 genes)  IEA  
GO:0000160 [list] [network] phosphorelay signal transduction system  (327 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016737253.2 [sequence] [blastp]
XP_016737254.2 [sequence] [blastp]
XP_016737255.2 [sequence] [blastp]
XP_040963494.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016737253.2)
nucl 10  (predict for XP_016737254.2)
nucl 10  (predict for XP_016737255.2)
nucl 10  (predict for XP_040963494.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016737253.2)
other 9  (predict for XP_016737254.2)
other 9  (predict for XP_016737255.2)
other 9  (predict for XP_040963494.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107947190
ghi-r.1
for
107938086
ghi-r.1
for
107929466
ghi-r.1
for
107904227
ath-u.5
for
PRR9
ath-u.5
for
PRR5
bra-r.6
for
103874318
bra-r.6
for
103866432
bra-r.6
for
103866306
bna-r.1
for
125608397
bna-r.1
for
106450475
bna-r.1
for
106428471
cit-r.1
for
102631246
cit-r.1
for
102622921
gma-u.5
for
100791698
gma-u.5
for
100784383
gma-u.5
for
100809490
vvi-u.5
for
100853219
vvi-u.5
for
100253885
ppo-u.5
for
7486808
ppo-u.5
for
7464491
ppo-u.5
for
7485182
mtr-u.5
for
11426713
mtr-u.5
for
11437345
mtr-u.5
for
25500611
sly-u.5
for
101262866
sly-u.5
for
101250283
sot-r.1
for
102603187
sot-r.1
for
102589008
nta-r.1
for
107801908
nta-r.1
for
107780646
nta-r.1
for
107806932
osa-u.5
for
4347674
zma-u.5
for
100273598
zma-u.5
for
100285170
tae-r.2
for
123104544
tae-r.2
for
123112819
tae-r.2
for
123122302
hvu-r.1
for
123400068
sbi-r.1
for
110432809
bdi-r.1
for
100823927


Ortholog ID: 2546
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107938086 LOC107904548 LOC107922980 PRR9 PRR5 LOC103874318 LOC103866432 LOC103854859 LOC106450475 LOC106366007 LOC106382607 LOC102631246 LOC102622921 LOC100809490 LOC100802674 LOC100779346 LOC100853219 LOC100253885 LOC7486808 LOC7464491 LOC7487745 LOC11426713 LOC11437345 LOC25500611 LOC101262866 LOC101250283 LOC102603187 LOC102589008 LOC107801908 LOC107780646 LOC107806932 LOC4347674 LOC100273598 LOC100285170 LOC123104544 LOC123112819 LOC123122302 LOC123400068 LOC110432809 LOC100823927
Function* two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR5 pseudo-response regulator 9 two-component response regulator-like protein two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR3 two-component response regulator-like PRR95 two-component response regulator-like PRR95 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like APRR9 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like APRR9 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like APRR5 two-component response regulator-like APRR9 two-component response regulator-like PRR95 Two-component response regulator-like APRR9 two-component response regulator-like PRR95 two-component response regulator-like PRR95 two-component response regulator-like PRR95 two-component response regulator-like PRR95 two-component response regulator-like PRR95 two-component response regulator-like PRR95 two-component response regulator-like PRR95
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 5
nta00510 N-Glycan biosynthesis 2
nta00330 Arginine and proline metabolism 2
nta00410 beta-Alanine metabolism 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 4
sbi00730 Thiamine metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107938086 107904548 107922980 819292 832518 103874318 103866432 103854859 106450475 106366007 106382607 102631246 102622921 100809490 100802674 100779346 100853219 100253885 7486808 7464491 7487745 11426713 11437345 25500611 101262866 101250283 102603187 102589008 107801908 107780646 107806932 4347674 100273598 100285170 123104544 123112819 123122302 123400068 110432809 100823927
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