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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262961   rhodanese-like domain-containing protein 4, chloroplastic 
 sly-r.6   101262961   rhodanese-like domain-containing protein 4, chloroplastic 
 sly-u.5   104649438   rhodanese-like domain-containing protein 4, chloroplastic 
 ath-u.5   TROL   thylakoid rhodanese-like protein 
 gma-u.5   100810796   rhodanese-like domain-containing protein 4, chloroplastic 
 gma-u.5   100784482   rhodanese-like domain-containing protein 4, chloroplastic 
 vvi-u.5   100255153   rhodanese-like domain-containing protein 4, chloroplastic 
 ppo-u.5   7494142   rhodanese-like domain-containing protein 4, chloroplastic 
 ppo-u.5   7497240   rhodanese-like domain-containing protein 4, chloroplastic 
 mtr-u.5   25500720   rhodanese-like domain-containing protein 4, chloroplastic 
 osa-u.5   4328925   protein THYLAKOID RHODANESE-LIKE, chloroplastic-like 
 zma-u.5   100192599   Rhodanese-like domain-containing protein 4 chloroplastic 
 zma-u.5   109940444   protein THYLAKOID RHODANESE-LIKE, chloroplastic 

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Top 50 coexpressed genes to 101262961 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101262961 (sly-u.5 coexpression data)

CoexMap"101262961"


slyLOC101262961 | Entrez gene ID : 101262961    
Species sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 3 1 2 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008410 [list] [network] CoA-transferase activity  (1 genes)  IEA  
Protein XP_004248078.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 3,  nucl 1,  cyto 1,  cyto_nucl 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_004248078.3)
Subcellular
localization
TargetP
other 6  (predict for XP_004248078.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262961
sly-r.6
for
101262961
sly-u.5
for
104649438
ath-u.5
for
TROL
gma-u.5
for
100810796
gma-u.5
for
100784482
vvi-u.5
for
100255153
ppo-u.5
for
7494142
ppo-u.5
for
7497240
mtr-u.5
for
25500720
osa-u.5
for
4328925
zma-u.5
for
100192599
zma-u.5
for
109940444


Ortholog ID: 5548
Species sly sly sot sot nta nta ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna cit cit osa zma zma tae tae hvu sbi bdi cre cre
Symbol LOC101262961 LOC104649438 LOC102603666 LOC102604510 LOC107820359 LOC107793804 TROL LOC100810796 LOC100784482 LOC103858829 LOC103836866 LOC100255153 LOC7497240 LOC7494142 LOC25500720 LOC107900941 LOC107933531 LOC106388753 LOC125593231 LOC127901020 LOC102615288 LOC4328925 LOC100192599 LOC109940444 LOC123072039 LOC123063127 LOC123445254 LOC8059050 LOC100831350 CHLRE_09g416850v5 CHLRE_12g515950v5
Function* rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic thylakoid rhodanese-like protein rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic protein THYLAKOID RHODANESE-LIKE, chloroplastic-like Rhodanese-like domain-containing protein 4 chloroplastic protein THYLAKOID RHODANESE-LIKE, chloroplastic protein THYLAKOID RHODANESE-LIKE, chloroplastic protein THYLAKOID RHODANESE-LIKE, chloroplastic protein THYLAKOID RHODANESE-LIKE, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic protein THYLAKOID RHODANESE-LIKE, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 8
sly03010 Ribosome 3
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 8
sly00710 Carbon fixation by Calvin cycle 5
sly00195 Photosynthesis 4
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 6
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
sot01230 Biosynthesis of amino acids 3
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 8
nta00196 Photosynthesis - antenna proteins 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 8
nta00196 Photosynthesis - antenna proteins 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 6
ath00196 Photosynthesis - antenna proteins 4
ath00860 Porphyrin metabolism 4
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 8
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 8
gma00195 Photosynthesis 4
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi01240 Biosynthesis of cofactors 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 5
ppo00710 Carbon fixation by Calvin cycle 4
ppo01230 Biosynthesis of amino acids 3
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 5
mtr00190 Oxidative phosphorylation 2
mtr00195 Photosynthesis 2
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00630 Glyoxylate and dicarboxylate metabolism 3
cit00380 Tryptophan metabolism 2
cit00260 Glycine, serine and threonine metabolism 2
cit00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00630 Glyoxylate and dicarboxylate metabolism 3
cit00380 Tryptophan metabolism 2
cit00260 Glycine, serine and threonine metabolism 2
cit00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 3
osa00195 Photosynthesis 3
osa00710 Carbon fixation by Calvin cycle 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 4
hvu00195 Photosynthesis 2
hvu00053 Ascorbate and aldarate metabolism 2
hvu00480 Glutathione metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre00620 Pyruvate metabolism 4
cre00061 Fatty acid biosynthesis 4
cre01212 Fatty acid metabolism 4
cre01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262961 104649438 102603666 102604510 107820359 107793804 827921 100810796 100784482 103858829 103836866 100255153 7497240 7494142 25500720 107900941 107933531 106388753 125593231 127901020 102615288 4328925 100192599 109940444 123072039 123063127 123445254 8059050 100831350 5722396 5728752
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