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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  101263284  putative pentatricopeptide repeat-containing protein At3g49142 
 sly-r.6  101263284  putative pentatricopeptide repeat-containing protein At3g49142 
 ath-u.5  AT3G49142  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100787841  putative pentatricopeptide repeat-containing protein At3g49142 
 vvi-u.5  100248393  putative pentatricopeptide repeat-containing protein At3g49142 
 mtr-u.5  11411029  putative pentatricopeptide repeat-containing protein At3g49142 
 osa-u.5  4332214  putative pentatricopeptide repeat-containing protein At3g49142 
 zma-u.5  100194323  Putative pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 101263284 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101263284 (sly-u.5 coexpression data)

CoexMap"101263284"


slyLOC101263284 | Entrez gene ID : 101263284
Species sly ath gma vvi mtr osa zma sbi nta bra cre hvu cit bdi ppo sot tae bna ghi
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5687 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004234215.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 1,  cyto 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_004234215.2)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_004234215.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
101263284

.

sly-r.6
for
101263284

.

ath-u.5
for
AT3G49142

.

gma-u.5
for
100787841

.

vvi-u.5
for
100248393

.

mtr-u.5
for
11411029

.

osa-u.5
for
4332214

.

zma-u.5
for
100194323

.


Ortholog ID: 11158
Species ath gma sly osa zma bra vvi mtr ghi ghi sbi sot cit nta nta
Symbol AT3G49142 LOC100787841 LOC101263284 LOC4332214 LOC100194323 LOC103875111 LOC100248393 LOC11411029 LOC107930163 LOC107890756 LOC110436867 LOC102578419 LOC102617539 LOC107803449 LOC107821977
Function* Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 Putative pentatricopeptide repeat-containing protein putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 10723034 100787841 101263284 4332214 100194323 103875111 100248393 11411029 107930163 107890756 110436867 102578419 102617539 107803449 107821977
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