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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1  102617539  putative pentatricopeptide repeat-containing protein At3g49142 
 ath-u.5  AT3G49142  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100787841  putative pentatricopeptide repeat-containing protein At3g49142 
 vvi-u.5  100248393  putative pentatricopeptide repeat-containing protein At3g49142 
 mtr-u.5  11411029  putative pentatricopeptide repeat-containing protein At3g49142 
 sly-u.5  101263284  putative pentatricopeptide repeat-containing protein At3g49142 
 osa-u.5  4332214  putative pentatricopeptide repeat-containing protein At3g49142 
 zma-u.5  100194323  Putative pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 102617539 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102617539 (cit-r.1 coexpression data)

CoexMap"102617539"


citLOC102617539 | Entrez gene ID : 102617539
Species cit ath gma vvi mtr sly osa zma hvu bna bra ghi ppo sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006490594.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 4,  mito 1  (predict for XP_006490594.2)
Subcellular
localization
TargetP
scret 6  (predict for XP_006490594.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cit-r.1
for
102617539


ath-u.5
for
AT3G49142


gma-u.5
for
100787841


vvi-u.5
for
100248393


mtr-u.5
for
11411029


sly-u.5
for
101263284


osa-u.5
for
4332214


zma-u.5
for
100194323



Ortholog ID: 11158
Species cit ath bra ghi ghi gma vvi mtr sly sot nta nta osa zma sbi
Symbol LOC102617539 AT3G49142 LOC103875111 LOC107930163 LOC107890756 LOC100787841 LOC100248393 LOC11411029 LOC101263284 LOC102578419 LOC107803449 LOC107821977 LOC4332214 LOC100194323 LOC110436867
Function* putative pentatricopeptide repeat-containing protein At3g49142 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 putative pentatricopeptide repeat-containing protein At3g49142 Putative pentatricopeptide repeat-containing protein putative pentatricopeptide repeat-containing protein At3g49142
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102617539 10723034 103875111 107930163 107890756 100787841 100248393 11411029 101263284 102578419 107803449 107821977 4332214 100194323 110436867
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