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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101263723   methionine--tRNA ligase, cytoplasmic 
 sly-r.6   101263723   methionine--tRNA ligase, cytoplasmic 
 sot-r.1   102583584   methionine--tRNA ligase, cytoplasmic-like 
 nta-r.1   107780548   methionine--tRNA ligase, cytoplasmic 
 nta-r.1   107821583   putative methionine--tRNA ligase 
 nta-r.1   107807152   methionine--tRNA ligase, cytoplasmic 
 ath-u.5   AT4G13780   methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS 
 gma-u.5   100809861   probable methionine--tRNA ligase 
 gma-u.5   100803506   methionine--tRNA ligase, cytoplasmic 
 gma-u.5   100786507   probable methionine--tRNA ligase 
 bra-r.6   103863598   methionine--tRNA ligase, cytoplasmic 
 vvi-u.5   100253638   probable methionine--tRNA ligase 
 vvi-u.5   100257273   probable methionine--tRNA ligase 
 ppo-u.5   7495848   probable methionine--tRNA ligase 
 ppo-u.5   18107083   probable methionine--tRNA ligase 
 mtr-u.5   11422324   probable methionine--tRNA ligase 
 mtr-u.5   11441226   probable methionine--tRNA ligase 
 ghi-r.1   107890497   methionine--tRNA ligase, cytoplasmic 
 ghi-r.1   107943818   methionine--tRNA ligase, cytoplasmic 
 bna-r.1   106426996   methionine--tRNA ligase, cytoplasmic 
 bna-r.1   106399721   methionine--tRNA ligase, cytoplasmic-like 
 bna-r.1   106430122   methionine--tRNA ligase, cytoplasmic 
 cit-r.1   102609867   probable methionine--tRNA ligase 
 cit-r.1   102620961   probable methionine--tRNA ligase 
 osa-u.5   4341140   probable methionine--tRNA ligase 
 osa-u.5   4348562   probable methionine--tRNA ligase 
 zma-u.5   103639438   probable methionine--tRNA ligase 
 zma-u.5   103654058   probable methionine--tRNA ligase 
 zma-u.5   103632740   probable methionine--tRNA ligase 
 tae-r.2   123157170   probable methionine--tRNA ligase 
 tae-r.2   123085264   probable methionine--tRNA ligase 
 tae-r.2   123102394   probable methionine--tRNA ligase 
 hvu-r.1   123396784   probable methionine--tRNA ligase 
 hvu-r.1   123449309   probable methionine--tRNA ligase 
 sbi-r.1   8085304   probable methionine--tRNA ligase 
 sbi-r.1   8071735   probable methionine--tRNA ligase 
 bdi-r.1   100833517   probable methionine--tRNA ligase 
 cre-r.1   CHLRE_02g087950v5   uncharacterized protein 

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Top 50 coexpressed genes to 101263723 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101263723 (sly-u.5 coexpression data)

CoexMap"101263723"


slyLOC101263723 | Entrez gene ID : 101263723      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 3 1 3 1 2 2 2 2 3 2 2 3 3 2 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00450 [list] [network] Selenocompound metabolism (16 genes)
sly00970 [list] [network] Aminoacyl-tRNA biosynthesis (114 genes)
GO BP
GO:0006431 [list] [network] methionyl-tRNA aminoacylation  (2 genes)  IEA  
GO CC
GO:0017101 [list] [network] aminoacyl-tRNA synthetase multienzyme complex  (5 genes)  IEA  
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO MF
GO:0004825 [list] [network] methionine-tRNA ligase activity  (2 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (29 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
Protein XP_004242831.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  cyto_plas 3  (predict for XP_004242831.2)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for XP_004242831.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101263723
sly-r.6
for
101263723
sot-r.1
for
102583584
nta-r.1
for
107780548
nta-r.1
for
107821583
nta-r.1
for
107807152
ath-u.5
for
AT4G13780
gma-u.5
for
100809861
gma-u.5
for
100803506
gma-u.5
for
100786507
bra-r.6
for
103863598
vvi-u.5
for
100253638
vvi-u.5
for
100257273
ppo-u.5
for
7495848
ppo-u.5
for
18107083
mtr-u.5
for
11422324
mtr-u.5
for
11441226
ghi-r.1
for
107890497
ghi-r.1
for
107943818
bna-r.1
for
106426996
bna-r.1
for
106399721
bna-r.1
for
106430122
cit-r.1
for
102609867
cit-r.1
for
102620961
osa-u.5
for
4341140
osa-u.5
for
4348562
zma-u.5
for
103639438
zma-u.5
for
103654058
zma-u.5
for
103632740
tae-r.2
for
123157170
tae-r.2
for
123085264
tae-r.2
for
123102394
hvu-r.1
for
123396784
hvu-r.1
for
123449309
sbi-r.1
for
8085304
sbi-r.1
for
8071735
bdi-r.1
for
100833517
cre-r.1
for
CHLRE_02g087950v5


Ortholog ID: 4410
Species sly sot nta nta nta ath gma gma gma bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol LOC101263723 LOC102583584 LOC107821583 LOC107807152 LOC107800068 AT4G13780 LOC100809861 LOC100803506 LOC100786507 LOC103863598 LOC100253638 LOC100257273 LOC7495848 LOC18107083 LOC11422324 LOC11441226 LOC107890497 LOC107943818 LOC106426996 LOC106399721 LOC106430122 LOC102609867 LOC102620961 LOC4341140 LOC4348562 LOC103639438 LOC103654058 LOC103632740 LOC123157170 LOC123098230 LOC123110570 LOC123396784 LOC123449309 LOC8085304 LOC8071735 LOC100833517 CHLRE_02g087950v5
Function* methionine--tRNA ligase, cytoplasmic methionine--tRNA ligase, cytoplasmic-like putative methionine--tRNA ligase methionine--tRNA ligase, cytoplasmic putative methionine--tRNA ligase methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS probable methionine--tRNA ligase methionine--tRNA ligase, cytoplasmic probable methionine--tRNA ligase methionine--tRNA ligase, cytoplasmic probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase methionine--tRNA ligase, cytoplasmic methionine--tRNA ligase, cytoplasmic methionine--tRNA ligase, cytoplasmic methionine--tRNA ligase, cytoplasmic-like methionine--tRNA ligase, cytoplasmic probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00450 Selenocompound metabolism 3
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 4
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 4
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 6
gma03050 Proteasome 4
gma00450 Selenocompound metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma01230 Biosynthesis of amino acids 5
gma01200 Carbon metabolism 3
gma00670 One carbon pool by folate 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma04120 Ubiquitin mediated proteolysis 3
gma03050 Proteasome 3
gma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 7
bra03040 Spliceosome 2
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 4
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00450 Selenocompound metabolism 2
ppo04142 Lysosome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 7
ppo01230 Biosynthesis of amino acids 4
ppo00510 N-Glycan biosynthesis 3
ppo00513 Various types of N-glycan biosynthesis 3
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 8
mtr03010 Ribosome 2
mtr00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr00970 Aminoacyl-tRNA biosynthesis 4
mtr00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 7
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi00860 Porphyrin metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 7
ghi00970 Aminoacyl-tRNA biosynthesis 7
ghi00860 Porphyrin metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 9
bna00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 9
bna00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 9
bna00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit03013 Nucleocytoplasmic transport 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 10
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 9
zma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00053 Ascorbate and aldarate metabolism 2
zma00280 Valine, leucine and isoleucine degradation 2
zma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 8
zma00450 Selenocompound metabolism 2
zma00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 9
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00620 Pyruvate metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 12
tae00450 Selenocompound metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 10
tae00450 Selenocompound metabolism 6
tae00190 Oxidative phosphorylation 2
tae00860 Porphyrin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu00300 Lysine biosynthesis 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 10
sbi03010 Ribosome 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101263723 102583584 107821583 107807152 107800068 827012 100809861 100803506 100786507 103863598 100253638 100257273 7495848 18107083 11422324 11441226 107890497 107943818 106426996 106399721 106430122 102609867 102620961 4341140 4348562 103639438 103654058 103632740 123157170 123098230 123110570 123396784 123449309 8085304 8071735 100833517 5727430
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