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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8071735   probable methionine--tRNA ligase 
 zma-u.5   103639438   probable methionine--tRNA ligase 
 zma-u.5   103632740   probable methionine--tRNA ligase 
 zma-u.5   103654058   probable methionine--tRNA ligase 
 osa-u.5   4341140   probable methionine--tRNA ligase 
 osa-u.5   4348562   probable methionine--tRNA ligase 
 ath-u.5   AT4G13780   methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS 
 gma-u.5   100809861   probable methionine--tRNA ligase 
 gma-u.5   100803506   methionine--tRNA ligase, cytoplasmic 
 gma-u.5   100786507   probable methionine--tRNA ligase 
 sly-u.5   101263723   methionine--tRNA ligase, cytoplasmic 
 vvi-u.5   100253638   probable methionine--tRNA ligase 
 vvi-u.5   100257273   probable methionine--tRNA ligase 
 ppo-u.5   7495848   probable methionine--tRNA ligase 
 ppo-u.5   18107083   probable methionine--tRNA ligase 
 mtr-u.5   11422324   probable methionine--tRNA ligase 
 mtr-u.5   11441226   probable methionine--tRNA ligase 

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Top 50 coexpressed genes to 8071735 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8071735 (sbi-r.1 coexpression data)

CoexMap"8071735"


sbiLOC8071735 | Entrez gene ID : 8071735    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 1 3 1 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00450 [list] [network] Selenocompound metabolism (15 genes)
sbi00970 [list] [network] Aminoacyl-tRNA biosynthesis (105 genes)
GO BP
GO:0006431 [list] [network] methionyl-tRNA aminoacylation  (3 genes)  IEA  
GO CC
GO:0017101 [list] [network] aminoacyl-tRNA synthetase multienzyme complex  (6 genes)  IEA  
GO:0005829 [list] [network] cytosol  (856 genes)  IEA  
GO MF
GO:0004825 [list] [network] methionine-tRNA ligase activity  (3 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (27 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2084 genes)  IEA  
Protein XP_002452612.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_002452612.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_002452612.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8071735

.
zma-u.5
for
103639438

.
zma-u.5
for
103632740

.
zma-u.5
for
103654058

.
osa-u.5
for
4341140

.
osa-u.5
for
4348562

.
ath-u.5
for
AT4G13780

.
gma-u.5
for
100809861

.
gma-u.5
for
100803506

.
gma-u.5
for
100786507

.
sly-u.5
for
101263723

.
vvi-u.5
for
100253638

.
vvi-u.5
for
100257273

.
ppo-u.5
for
7495848

.
ppo-u.5
for
18107083

.
mtr-u.5
for
11422324

.
mtr-u.5
for
11441226

.


Ortholog ID: 4410
Species ath gma gma sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot cit cit bdi nta nta
Symbol AT4G13780 LOC100786507 LOC100809861 LOC101263723 LOC4348562 LOC4341140 LOC103632740 LOC103639438 LOC103863598 LOC100253638 LOC100257273 LOC7495848 LOC18107083 LOC11441226 LOC11422324 LOC123098230 LOC123110570 LOC123396784 LOC123449309 LOC107890497 LOC107943818 LOC106426996 LOC106430122 CHLRE_02g087950v5 LOC8071735 LOC8085304 LOC102583584 LOC102620961 LOC102609867 LOC100833517 LOC107800068 LOC107821583
Function* methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS probable methionine--tRNA ligase probable methionine--tRNA ligase methionine--tRNA ligase, cytoplasmic probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase methionine--tRNA ligase, cytoplasmic probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase methionine--tRNA ligase, cytoplasmic methionine--tRNA ligase, cytoplasmic methionine--tRNA ligase, cytoplasmic methionine--tRNA ligase, cytoplasmic uncharacterized protein probable methionine--tRNA ligase probable methionine--tRNA ligase methionine--tRNA ligase, cytoplasmic-like probable methionine--tRNA ligase probable methionine--tRNA ligase probable methionine--tRNA ligase putative methionine--tRNA ligase putative methionine--tRNA ligase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma04120 Ubiquitin mediated proteolysis 3
gma03050 Proteasome 3
gma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 6
gma03050 Proteasome 4
gma00450 Selenocompound metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 10
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 8
zma00450 Selenocompound metabolism 2
zma00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 9
zma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 7
bra03040 Spliceosome 2
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 4
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00450 Selenocompound metabolism 2
ppo04142 Lysosome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 7
ppo01230 Biosynthesis of amino acids 4
ppo00510 N-Glycan biosynthesis 3
ppo00513 Various types of N-glycan biosynthesis 3
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr00970 Aminoacyl-tRNA biosynthesis 4
mtr00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 8
mtr03010 Ribosome 2
mtr00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 12
tae00450 Selenocompound metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 10
tae00450 Selenocompound metabolism 6
tae00190 Oxidative phosphorylation 2
tae00860 Porphyrin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu00300 Lysine biosynthesis 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 7
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi00860 Porphyrin metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 7
ghi00970 Aminoacyl-tRNA biosynthesis 7
ghi00860 Porphyrin metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 9
bna00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 9
bna00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 10
sbi03010 Ribosome 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit03013 Nucleocytoplasmic transport 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 4
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00450 Selenocompound metabolism 3
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827012 100786507 100809861 101263723 4348562 4341140 103632740 103639438 103863598 100253638 100257273 7495848 18107083 11441226 11422324 123098230 123110570 123396784 123449309 107890497 107943818 106426996 106430122 5727430 8071735 8085304 102583584 102620961 102609867 100833517 107800068 107821583
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