ATTED-II : GeneCoexpression result

Species	Gene	Description
sly-u.5	101263928	DNA topoisomerase 6 subunit B
sly-r.6	101263928	DNA topoisomerase 6 subunit B
ath-u.5	TOP6B	topoisomerase 6 subunit B
gma-u.5	100809558	DNA topoisomerase 6 subunit B
vvi-u.5	100265632	DNA topoisomerase 6 subunit B
ppo-u.5	18097264	DNA topoisomerase 6 subunit B
mtr-u.5	11421475	DNA topoisomerase 6 subunit B
osa-u.5	TOP6B	DNA topoisomerase 6 subunit B-like
zma-u.5	103632502	DNA topoisomerase 6 subunit B

functional annotation

KEGG

GO BP

GO:0006265 [list] [network] DNA topological change

(9 genes)

IEA

GO CC

GO MF

GO:0003918 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	(7 genes)	IEA
GO:0003677 [list] [network] DNA binding	(1883 genes)	IEA
GO:0005524 [list] [network] ATP binding	(1916 genes)	IEA

Protein

XP_004228355.1 [sequence] [blastp]
XP_025885715.2 [sequence] [blastp]
XP_069153217.1 [sequence] [blastp]
XP_069153218.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 4, chlo 1, pero 1	(predict for XP_004228355.1)
cyto 8, chlo 1, cysk 1, golg_plas 1	(predict for XP_025885715.2)
cysk 6, nucl 2, cyto 1	(predict for XP_069153217.1)
cyto 8, chlo 1, cysk 1, golg_plas 1	(predict for XP_069153218.1)

Subcellular
localization
TargetP

other 8, chlo 4	(predict for XP_004228355.1)
mito 5, other 3	(predict for XP_025885715.2)
other 9	(predict for XP_069153217.1)
mito 5, other 3	(predict for XP_069153218.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101263928	sly-r.6 for 101263928	ath-u.5 for TOP6B	gma-u.5 for 100809558	vvi-u.5 for 100265632	ppo-u.5 for 18097264	mtr-u.5 for 11421475	osa-u.5 for TOP6B	zma-u.5 for 103632502

Ortholog ID: 9498

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

TOP6B

TOP6B

Function^*

DNA topoisomerase 6 subunit B

DNA topoisomerase 6 subunit B-like

DNA topoisomerase 6 subunit B

topoisomerase 6 subunit B

DNA topoisomerase 6 subunit B

DNA topoisomerase 6 subunit B-like

DNA topoisomerase 6 subunit B

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00260	Glycine, serine and threonine metabolism	2
sot00470	D-Amino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00900	Terpenoid backbone biosynthesis	3
nta03008	Ribosome biogenesis in eukaryotes	2
nta03013	Nucleocytoplasmic transport	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4
gma03015	mRNA surveillance pathway	3
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	4
ppo03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	6
mtr03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	5
ghi03410	Base excision repair	3
ghi03420	Nucleotide excision repair	3
ghi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	2
ghi03410	Base excision repair	2
ghi03420	Nucleotide excision repair	2
ghi03430	Mismatch repair	2
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	2
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03083	Polycomb repressive complex	2
osa03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00270	Cysteine and methionine metabolism	2
zma03082	ATP-dependent chromatin remodeling	2
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	5
tae03015	mRNA surveillance pathway	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03030	DNA replication	3
tae03410	Base excision repair	3
tae03420	Nucleotide excision repair	3
tae03430	Mismatch repair	3
tae03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	7
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	3
sbi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03083	Polycomb repressive complex	2
bdi03020	RNA polymerase	2
bdi03008	Ribosome biogenesis in eukaryotes	2
bdi03440	Homologous recombination	2

Expression

Expression pattern

Entrez Gene ID^*

101263928

102592185

107763714

107815486

821626

100809558

103869277

100265632

18097264

11421475

121225308

107945355

106345840

125594253

102615212

4346606

103632502

123120981

123103413

123394977

8062034

100844704

5715184

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 101263928 (sly-u.5 coexpression data)

Top 50 enrichment test to 101263928 (sly-u.5 coexpression data)


Species	sly	ath	gma	vvi	ppo	mtr	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	2	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101263928 (sly-u.5 coexpression data)

Top 50 enrichment test to 101263928 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**