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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101264116   vacuolar protein sorting-associated protein 45 homolog 
 sly-r.6   101264116   vacuolar protein sorting-associated protein 45 homolog 
 sly-m.5   101264116   vacuolar protein sorting-associated protein 45 homolog 
 ath-u.5   VPS45   vacuolar protein sorting 45 
 gma-u.5   100802965   vacuolar protein sorting-associated protein 45 homolog 
 gma-u.5   100782786   vacuolar protein sorting-associated protein 45 homolog 
 vvi-u.5   100243832   vacuolar protein sorting-associated protein 45 homolog 
 ppo-u.5   7492449   vacuolar protein sorting-associated protein 45 homolog 
 ppo-u.5   7466414   vacuolar protein sorting-associated protein 45 homolog 
 mtr-u.5   25489769   vacuolar protein sorting-associated protein 45 homolog 
 osa-u.5   4329228   vacuolar protein sorting-associated protein 45 homolog 
 zma-u.5   100286026   uncharacterized LOC100286026 

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Top 50 coexpressed genes to 101264116 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101264116 (sly-u.5 coexpression data)

CoexMap"101264116"


slyLOC101264116 | Entrez gene ID : 101264116      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04144 [list] [network] Endocytosis (167 genes)
GO BP
GO:0006886 [list] [network] intracellular protein transport  (272 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (469 genes)  IEA  
GO CC
GO:0000139 [list] [network] Golgi membrane  (75 genes)  IEA  
GO MF
Protein XP_004237740.1 [sequence] [blastp]
XP_010320037.1 [sequence] [blastp]
XP_010320038.1 [sequence] [blastp]
XP_069153377.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  pero 1,  cysk 1,  golg 1  (predict for XP_004237740.1)
cyto 6,  chlo 2,  pero 1,  cysk 1,  golg 1  (predict for XP_010320037.1)
cyto 4,  nucl 1,  mito 1,  chlo 1,  extr 1,  pero 1,  golg 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  mito_plas 1  (predict for XP_010320038.1)
cyto 4,  nucl 1,  mito 1,  chlo 1,  extr 1,  pero 1,  golg 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  mito_plas 1  (predict for XP_069153377.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_004237740.1)
other 6,  mito 3  (predict for XP_010320037.1)
scret 6,  other 3  (predict for XP_010320038.1)
scret 6,  other 3  (predict for XP_069153377.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101264116

.
sly-r.6
for
101264116

.
sly-m.5
for
101264116

.
ath-u.5
for
VPS45

.
gma-u.5
for
100802965

.
gma-u.5
for
100782786

.
vvi-u.5
for
100243832

.
ppo-u.5
for
7492449

.
ppo-u.5
for
7466414

.
mtr-u.5
for
25489769

.
osa-u.5
for
4329228

.
zma-u.5
for
100286026

.


Ortholog ID: 9298
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol VPS45 LOC100802965 LOC100782786 LOC101264116 LOC4329228 LOC100286026 LOC103853060 LOC100243832 LOC7492449 LOC7466414 LOC25489769 LOC123052920 LOC123188877 LOC123426321 LOC107950689 LOC107951986 LOC106451253 LOC106411160 CHLRE_07g333950v5 LOC8070030 LOC102593164 LOC102620336 LOC100824201 LOC107795570 LOC107766753
Function* vacuolar protein sorting 45 vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog uncharacterized LOC100286026 vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog uncharacterized protein vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03022 Basal transcription factors 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00785 Lipoic acid metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr04142 Lysosome 2
mtr05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 10
tae04142 Lysosome 8
tae05100 Bacterial invasion of epithelial cells 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 12
tae04142 Lysosome 6
tae05100 Bacterial invasion of epithelial cells 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04142 Lysosome 2
hvu05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00440 Phosphonate and phosphinate metabolism 4
ghi00564 Glycerophospholipid metabolism 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00440 Phosphonate and phosphinate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 4
cre04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04144 Endocytosis 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta03015 mRNA surveillance pathway 2
nta04136 Autophagy - other 2
nta04382 Cornified envelope formation 2
nta04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844050 100802965 100782786 101264116 4329228 100286026 103853060 100243832 7492449 7466414 25489769 123052920 123188877 123426321 107950689 107951986 106451253 106411160 5725689 8070030 102593164 102620336 100824201 107795570 107766753
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