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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107951986   vacuolar protein sorting-associated protein 45 homolog 
 ath-u.5   VPS45   vacuolar protein sorting 45 
 gma-u.5   100802965   vacuolar protein sorting-associated protein 45 homolog 
 gma-u.5   100782786   vacuolar protein sorting-associated protein 45 homolog 
 vvi-u.5   100243832   vacuolar protein sorting-associated protein 45 homolog 
 ppo-u.5   7492449   vacuolar protein sorting-associated protein 45 homolog 
 ppo-u.5   7466414   vacuolar protein sorting-associated protein 45 homolog 
 mtr-u.5   25489769   vacuolar protein sorting-associated protein 45 homolog 
 sly-u.5   101264116   vacuolar protein sorting-associated protein 45 homolog 
 osa-u.5   4329228   vacuolar protein sorting-associated protein 45 homolog 
 zma-u.5   100286026   uncharacterized LOC100286026 

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Top 50 coexpressed genes to 107951986 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107951986 (ghi-r.1 coexpression data)

CoexMap"107951986"


ghiLOC107951986 | Entrez gene ID : 107951986    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04144 [list] [network] Endocytosis (463 genes)
GO BP
GO:0006886 [list] [network] intracellular protein transport  (804 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (1389 genes)  IEA  
GO CC
GO:0000139 [list] [network] Golgi membrane  (243 genes)  IEA  
GO MF
Protein XP_016742676.1 [sequence] [blastp]
XP_016742677.1 [sequence] [blastp]
XP_040935370.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  plas 1,  pero 1,  cysk 1,  golg 1,  golg_plas 1,  cysk_plas 1  (predict for XP_016742676.1)
cyto 4,  chlo 3,  plas 1,  chlo_mito 1  (predict for XP_016742677.1)
chlo 4,  mito 4,  cyto 1  (predict for XP_040935370.1)
Subcellular
localization
TargetP
mito 5,  other 5  (predict for XP_016742676.1)
mito 5,  other 5  (predict for XP_016742677.1)
mito 7,  other 3  (predict for XP_040935370.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107951986
ath-u.5
for
VPS45
gma-u.5
for
100802965
gma-u.5
for
100782786
vvi-u.5
for
100243832
ppo-u.5
for
7492449
ppo-u.5
for
7466414
mtr-u.5
for
25489769
sly-u.5
for
101264116
osa-u.5
for
4329228
zma-u.5
for
100286026


Ortholog ID: 9298
Species ghi ghi ath bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107950689 LOC107951986 VPS45 LOC103853060 LOC106451253 LOC106411160 LOC102620336 LOC100802965 LOC100782786 LOC100243832 LOC7492449 LOC7466414 LOC25489769 LOC101264116 LOC102593164 LOC107795570 LOC107766753 LOC4329228 LOC100286026 LOC123052920 LOC123188877 LOC123426321 LOC8070030 LOC100824201 CHLRE_07g333950v5
Function* vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting 45 vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog uncharacterized LOC100286026 vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog vacuolar protein sorting-associated protein 45 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00440 Phosphonate and phosphinate metabolism 4
ghi00564 Glycerophospholipid metabolism 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00440 Phosphonate and phosphinate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04144 Endocytosis 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03022 Basal transcription factors 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00785 Lipoic acid metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr04142 Lysosome 2
mtr05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta03015 mRNA surveillance pathway 2
nta04136 Autophagy - other 2
nta04382 Cornified envelope formation 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 10
tae04142 Lysosome 8
tae05100 Bacterial invasion of epithelial cells 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 12
tae04142 Lysosome 6
tae05100 Bacterial invasion of epithelial cells 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04142 Lysosome 2
hvu05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 4
cre04130 SNARE interactions in vesicular transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107950689 107951986 844050 103853060 106451253 106411160 102620336 100802965 100782786 100243832 7492449 7466414 25489769 101264116 102593164 107795570 107766753 4329228 100286026 123052920 123188877 123426321 8070030 100824201 5725689
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