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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101264179   pentatricopeptide repeat-containing protein At1g79540 
 sly-r.6   101264179   pentatricopeptide repeat-containing protein At1g79540 
 ath-u.5   AT1G79540   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100788461   pentatricopeptide repeat-containing protein At1g79540 
 vvi-u.5   100267468   pentatricopeptide repeat-containing protein At1g79540 
 ppo-u.5   7473611   pentatricopeptide repeat-containing protein At1g79540 
 mtr-u.5   11419088   pentatricopeptide repeat-containing protein At1g79540 
 mtr-u.5   25489851   pentatricopeptide repeat-containing protein At1g79540 
 mtr-u.5   120577508   pentatricopeptide repeat-containing protein At1g79540 
 osa-u.5   4346390   pentatricopeptide repeat-containing protein At1g79540 

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Top 50 coexpressed genes to 101264179 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101264179 (sly-u.5 coexpression data)

CoexMap"101264179"


slyLOC101264179 | Entrez gene ID : 101264179    
Species sly ath gma vvi ppo mtr osa sbi nta bra cre hvu cit bdi sot zma tae bna ghi
Paralog 2 1 1 1 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_010316424.1 [sequence] [blastp]
XP_010316425.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  chlo 2,  nucl 2,  cyto_mito 2,  cyto 1,  nucl_plas 1  (predict for XP_010316424.1)
mito 3,  chlo 2,  nucl 2,  cyto_mito 2,  cyto 1,  nucl_plas 1  (predict for XP_010316425.1)
Subcellular
localization
TargetP
mito 3,  scret 3  (predict for XP_010316424.1)
mito 3,  scret 3  (predict for XP_010316425.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101264179

.
sly-r.6
for
101264179

.
ath-u.5
for
AT1G79540

.
gma-u.5
for
100788461

.
vvi-u.5
for
100267468

.
ppo-u.5
for
7473611

.
mtr-u.5
for
11419088

.
mtr-u.5
for
25489851

.
mtr-u.5
for
120577508

.
osa-u.5
for
4346390

.


Ortholog ID: 11531
Species ath gma sly osa bra vvi ppo mtr mtr hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G79540 LOC100788461 LOC101264179 LOC4346390 LOC103853197 LOC100267468 LOC7473611 LOC11424792 LOC25489851 LOC123452498 LOC121229715 LOC107943662 LOC106429716 LOC106381506 LOC8062596 LOC102593074 LOC102624749 LOC104584874 LOC107813283 LOC107785143
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540-like pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540-like pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540-like pentatricopeptide repeat-containing protein At1g79540
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 4
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
ppo03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00290 Valine, leucine and isoleucine biosynthesis 5
nta01210 2-Oxocarboxylic acid metabolism 5
nta01230 Biosynthesis of amino acids 5
nta00270 Cysteine and methionine metabolism 3
nta00660 C5-Branched dibasic acid metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844292 100788461 101264179 4346390 103853197 100267468 7473611 11424792 25489851 123452498 121229715 107943662 106429716 106381506 8062596 102593074 102624749 104584874 107813283 107785143
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