Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102624749   pentatricopeptide repeat-containing protein At1g79540 
 ath-u.5   AT1G79540   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103853197   pentatricopeptide repeat-containing protein At1g79540 
 ghi-r.1   121229715   pentatricopeptide repeat-containing protein At1g79540 
 ghi-r.1   107943662   pentatricopeptide repeat-containing protein At1g79540 
 bna-r.1   106381506   pentatricopeptide repeat-containing protein At1g79540 
 bna-r.1   106429716   pentatricopeptide repeat-containing protein At1g79540-like 
 gma-u.5   100788461   pentatricopeptide repeat-containing protein At1g79540 
 vvi-u.5   100267468   pentatricopeptide repeat-containing protein At1g79540 
 ppo-u.5   7473611   pentatricopeptide repeat-containing protein At1g79540 
 mtr-u.5   11424792   pentatricopeptide repeat-containing protein At1g79540 
 mtr-u.5   11419088   pentatricopeptide repeat-containing protein At1g79540 
 mtr-u.5   120577508   pentatricopeptide repeat-containing protein At1g79540 
 sly-u.5   101264179   pentatricopeptide repeat-containing protein At1g79540 
 sot-r.1   102593074   pentatricopeptide repeat-containing protein At1g79540 
 nta-r.1   107785143   pentatricopeptide repeat-containing protein At1g79540 
 nta-r.1   107813283   pentatricopeptide repeat-containing protein At1g79540-like 
 osa-u.5   4346390   pentatricopeptide repeat-containing protein At1g79540 
 hvu-r.1   123452498   pentatricopeptide repeat-containing protein At1g79540-like 
 sbi-r.1   8062596   pentatricopeptide repeat-containing protein At1g79540 
 bdi-r.1   104584874   pentatricopeptide repeat-containing protein At1g79540 

close


Top 50 coexpressed genes to 102624749 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102624749 (cit-r.1 coexpression data)

CoexMap"102624749"


citLOC102624749 | Entrez gene ID : 102624749    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa hvu sbi bdi zma cre tae
Paralog 1 1 1 2 2 1 1 1 3 1 1 2 1 1 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006492928.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  extr 1,  pero 1,  cyto_mito 1,  mito_plas 1  (predict for XP_006492928.2)
Subcellular
localization
TargetP
chlo 3  (predict for XP_006492928.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102624749
ath-u.5
for
AT1G79540
bra-r.6
for
103853197
ghi-r.1
for
121229715
ghi-r.1
for
107943662
bna-r.1
for
106381506
bna-r.1
for
106429716
gma-u.5
for
100788461
vvi-u.5
for
100267468
ppo-u.5
for
7473611
mtr-u.5
for
11424792
mtr-u.5
for
11419088
mtr-u.5
for
120577508
sly-u.5
for
101264179
sot-r.1
for
102593074
nta-r.1
for
107785143
nta-r.1
for
107813283
osa-u.5
for
4346390
hvu-r.1
for
123452498
sbi-r.1
for
8062596
bdi-r.1
for
104584874


Ortholog ID: 11531
Species cit ath bra ghi ghi bna bna gma vvi ppo mtr mtr mtr sly sot nta nta osa hvu sbi bdi
Symbol LOC102624749 AT1G79540 LOC103853197 LOC121229715 LOC107943662 LOC106381506 LOC106429716 LOC100788461 LOC100267468 LOC7473611 LOC11424792 LOC11419088 LOC25489851 LOC101264179 LOC102593074 LOC107785143 LOC107813283 LOC4346390 LOC123452498 LOC8062596 LOC104584874
Function* pentatricopeptide repeat-containing protein At1g79540 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540-like pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540-like pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540-like pentatricopeptide repeat-containing protein At1g79540 pentatricopeptide repeat-containing protein At1g79540
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
ppo03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00290 Valine, leucine and isoleucine biosynthesis 5
nta01210 2-Oxocarboxylic acid metabolism 5
nta01230 Biosynthesis of amino acids 5
nta00270 Cysteine and methionine metabolism 3
nta00660 C5-Branched dibasic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 4
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102624749 844292 103853197 121229715 107943662 106381506 106429716 100788461 100267468 7473611 11424792 11419088 25489851 101264179 102593074 107785143 107813283 4346390 123452498 8062596 104584874
The preparation time of this page was 0.1 [sec].