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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101265573   pentatricopeptide repeat-containing protein At2g37310 
 sly-r.6   101265573   pentatricopeptide repeat-containing protein At2g37310 
 ath-u.5   AT2G37310   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100796404   pentatricopeptide repeat-containing protein At2g37310 
 vvi-u.5   100261849   pentatricopeptide repeat-containing protein At2g37310 
 ppo-u.5   7492269   pentatricopeptide repeat-containing protein At2g37310 
 mtr-u.5   25484072   pentatricopeptide repeat-containing protein At2g37310 
 zma-u.5   103634480   pentatricopeptide repeat-containing protein At2g37310 

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Top 50 coexpressed genes to 101265573 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101265573 (sly-u.5 coexpression data)

CoexMap"101265573"


slyLOC101265573 | Entrez gene ID : 101265573      
Species sly ath gma vvi ppo mtr zma bdi hvu bra cit bna sbi ghi osa sot nta cre tae
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5687 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_025888695.1 [sequence] [blastp]
XP_025888696.1 [sequence] [blastp]
XP_069144960.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_025888695.1)
chlo 9,  mito 1  (predict for XP_025888696.1)
chlo 9,  mito 1  (predict for XP_069144960.1)
Subcellular
localization
TargetP
other 4  (predict for XP_025888695.1)
other 4  (predict for XP_025888696.1)
other 4  (predict for XP_069144960.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101265573
sly-r.6
for
101265573
ath-u.5
for
AT2G37310
gma-u.5
for
100796404
vvi-u.5
for
100261849
ppo-u.5
for
7492269
mtr-u.5
for
25484072
zma-u.5
for
103634480


Ortholog ID: 10699
Species sly sot nta nta ath gma bra vvi ppo mtr ghi ghi bna bna cit zma tae hvu bdi
Symbol LOC101265573 LOC102583712 LOC107786245 LOC107812677 AT2G37310 LOC100796404 LOC103865588 LOC100261849 LOC7492269 LOC25484072 LOC107889726 LOC107891015 LOC106447384 LOC106387364 LOC102609205 LOC103634480 LOC123085520 LOC123448962 LOC100845966
Function* pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310-like pentatricopeptide repeat-containing protein At2g37310-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101265573 102583712 107786245 107812677 818308 100796404 103865588 100261849 7492269 25484072 107889726 107891015 106447384 106387364 102609205 103634480 123085520 123448962 100845966
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