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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107889726   pentatricopeptide repeat-containing protein At2g37310 
 ghi-r.1   107891015   pentatricopeptide repeat-containing protein At2g37310 
 ath-u.5   AT2G37310   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103865588   pentatricopeptide repeat-containing protein At2g37310 
 bna-r.1   106387364   pentatricopeptide repeat-containing protein At2g37310 
 bna-r.1   106447384   pentatricopeptide repeat-containing protein At2g37310 
 cit-r.1   102609205   pentatricopeptide repeat-containing protein At2g37310 
 gma-u.5   100796404   pentatricopeptide repeat-containing protein At2g37310 
 vvi-u.5   100261849   pentatricopeptide repeat-containing protein At2g37310 
 ppo-u.5   7492269   pentatricopeptide repeat-containing protein At2g37310 
 mtr-u.5   25484072   pentatricopeptide repeat-containing protein At2g37310 
 sly-u.5   101265573   pentatricopeptide repeat-containing protein At2g37310 
 sot-r.1   102583712   pentatricopeptide repeat-containing protein At2g37310 
 nta-r.1   107812677   pentatricopeptide repeat-containing protein At2g37310-like 
 nta-r.1   107786245   pentatricopeptide repeat-containing protein At2g37310-like 
 zma-u.5   103634480   pentatricopeptide repeat-containing protein At2g37310 
 tae-r.2   123097832   pentatricopeptide repeat-containing protein At2g37310 
 tae-r.2   123085520   pentatricopeptide repeat-containing protein At2g37310 
 hvu-r.1   123448962   pentatricopeptide repeat-containing protein At2g37310 
 bdi-r.1   100845966   pentatricopeptide repeat-containing protein At2g37310 

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Top 50 coexpressed genes to 107889726 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107889726 (ghi-r.1 coexpression data)

CoexMap"107889726"


ghiLOC107889726 | Entrez gene ID : 107889726    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta zma tae hvu bdi cre osa sbi
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 2 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016669754.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_016669754.2)
Subcellular
localization
TargetP
mito 6  (predict for XP_016669754.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107889726
ghi-r.1
for
107891015
ath-u.5
for
AT2G37310
bra-r.6
for
103865588
bna-r.1
for
106387364
bna-r.1
for
106447384
cit-r.1
for
102609205
gma-u.5
for
100796404
vvi-u.5
for
100261849
ppo-u.5
for
7492269
mtr-u.5
for
25484072
sly-u.5
for
101265573
sot-r.1
for
102583712
nta-r.1
for
107812677
nta-r.1
for
107786245
zma-u.5
for
103634480
tae-r.2
for
123097832
tae-r.2
for
123085520
hvu-r.1
for
123448962
bdi-r.1
for
100845966


Ortholog ID: 10699
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta zma tae tae hvu bdi
Symbol LOC107889726 LOC107891015 AT2G37310 LOC103865588 LOC106387364 LOC106447384 LOC102609205 LOC100796404 LOC100261849 LOC7492269 LOC25484072 LOC101265573 LOC102583712 LOC107812677 LOC107786245 LOC103634480 LOC123097832 LOC123085520 LOC123448962 LOC100845966
Function* pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310-like pentatricopeptide repeat-containing protein At2g37310-like pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310 pentatricopeptide repeat-containing protein At2g37310
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107889726 107891015 818308 103865588 106387364 106447384 102609205 100796404 100261849 7492269 25484072 101265573 102583712 107812677 107786245 103634480 123097832 123085520 123448962 100845966
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