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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101266991   clathrin light chain 1 
 sly-r.6   101266991   clathrin light chain 1 
 sly-m.5   101266991   clathrin light chain 1 
 sly-u.5   101261300   clathrin light chain 1 
 sly-u.5   101250146   clathrin light chain 2 
 ath-u.5   AT2G20760   Clathrin light chain protein 
 ath-u.5   CLC2   Clathrin light chain protein 
 ath-u.5   AT3G51890   Clathrin light chain protein 
 gma-u.5   100813474   uncharacterized LOC100813474 
 gma-u.5   100788673   clathrin light chain 1 
 gma-u.5   100783050   clathrin light chain 1 
 vvi-u.5   100248438   clathrin light chain 2 
 vvi-u.5   100854215   clathrin light chain 1 
 ppo-u.5   7466063   clathrin light chain 2 
 ppo-u.5   7488013   clathrin light chain 2 
 ppo-u.5   7490332   clathrin light chain 2 
 mtr-u.5   11421620   clathrin light chain 1 
 mtr-u.5   25493188   clathrin light chain 1 
 osa-u.5   4337419   clathrin light chain 1-like 
 osa-u.5   4342159   clathrin light chain 2-like 
 zma-u.5   100277113   uncharacterized LOC100277113 
 zma-u.5   113475843   uncharacterized LOC113475843 
 zma-u.5   100216721   Clathrin light chain 2 

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Top 50 coexpressed genes to 101266991 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101266991 (sly-u.5 coexpression data)

CoexMap"101266991"


slyLOC101266991 | Entrez gene ID : 101266991      
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 3 2 3 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0072583 [list] [network] clathrin-dependent endocytosis  (31 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (272 genes)  IEA  
GO CC
GO:0030130 [list] [network] clathrin coat of trans-Golgi network vesicle  (10 genes)  IEA  
GO:0030132 [list] [network] clathrin coat of coated pit  (11 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (899 genes)  IEA  
GO MF
GO:0032050 [list] [network] clathrin heavy chain binding  (21 genes)  IEA  
GO:0005198 [list] [network] structural molecule activity  (479 genes)  IEA  
Protein XP_004232846.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_004232846.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004232846.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101266991
sly-r.6
for
101266991
sly-m.5
for
101266991
sly-u.5
for
101261300
sly-u.5
for
101250146
ath-u.5
for
AT2G20760
ath-u.5
for
CLC2
ath-u.5
for
AT3G51890
gma-u.5
for
100813474
gma-u.5
for
100788673
gma-u.5
for
100783050
vvi-u.5
for
100248438
vvi-u.5
for
100854215
ppo-u.5
for
7466063
ppo-u.5
for
7488013
ppo-u.5
for
7490332
mtr-u.5
for
11421620
mtr-u.5
for
25493188
osa-u.5
for
4337419
osa-u.5
for
4342159
zma-u.5
for
100277113
zma-u.5
for
113475843
zma-u.5
for
100216721


Ortholog ID: 1452
Species sly sly sot sot nta nta ath ath gma gma bra bra vvi vvi ppo ppo mtr ghi ghi bna bna cit cit osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC101266991 LOC101250146 LOC102601027 LOC102585812 LOC107763511 LOC107760966 AT3G51890 CLC2 LOC100820255 LOC100813474 LOC103842584 LOC103846752 LOC100248438 LOC100854215 LOC7488013 LOC7490332 LOC11421620 LOC121212704 LOC107960000 LOC106368789 LOC106391573 LOC102611533 LOC102626898 LOC4337419 LOC4342159 LOC113475843 LOC100277113 LOC123164928 LOC123191067 LOC123407289 LOC123428331 LOC8069249 LOC8076473 LOC100825998 LOC100829679
Function* clathrin light chain 1 clathrin light chain 2 clathrin light chain 1-like clathrin light chain 2-like clathrin light chain 2-like clathrin light chain 2 Clathrin light chain protein Clathrin light chain protein clathrin light chain 1 uncharacterized LOC100813474 clathrin light chain 1 clathrin light chain 2 clathrin light chain 2 clathrin light chain 1 clathrin light chain 2 clathrin light chain 2 clathrin light chain 1 clathrin light chain 2 clathrin light chain 2 clathrin light chain 1 clathrin light chain 2 clathrin light chain 1-like clathrin light chain 3-like clathrin light chain 1-like clathrin light chain 2-like uncharacterized LOC113475843 uncharacterized LOC100277113 clathrin light chain 2 clathrin light chain 1 clathrin light chain 2 clathrin light chain 1-like clathrin light chain 2 clathrin light chain 1 clathrin light chain 1 clathrin light chain 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta04130 SNARE interactions in vesicular transport 4
nta04145 Phagosome 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03020 RNA polymerase 2
ath03420 Nucleotide excision repair 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma05100 Bacterial invasion of epithelial cells 3
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03060 Protein export 4
bra04141 Protein processing in endoplasmic reticulum 4
bra04145 Phagosome 4
bra04016 MAPK signaling pathway - plant 2
bra04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 4
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01250 Biosynthesis of nucleotide sugars 4
vvi00520 Amino sugar and nucleotide sugar metabolism 3
vvi00541 Biosynthesis of various nucleotide sugars 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 6
ppo03010 Ribosome 3
ppo03060 Protein export 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 5
bna04075 Plant hormone signal transduction 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 5
zma04145 Phagosome 4
zma04517 IgSF CAM signaling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 4
tae04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 3
hvu01250 Biosynthesis of nucleotide sugars 3
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 6
bdi01250 Biosynthesis of nucleotide sugars 6
bdi00040 Pentose and glucuronate interconversions 2
bdi00053 Ascorbate and aldarate metabolism 2
bdi00541 Biosynthesis of various nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101266991 101250146 102601027 102585812 107763511 107760966 824352 818594 100820255 100813474 103842584 103846752 100248438 100854215 7488013 7490332 11421620 121212704 107960000 106368789 106391573 102611533 102626898 4337419 4342159 113475843 100277113 123164928 123191067 123407289 123428331 8069249 8076473 100825998 100829679
The preparation time of this page was 2.5 [sec].