Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   CMT2   DNA (cytosine-5)-methyltransferase CMT2 
 sly-r.6   CMT2   DNA (cytosine-5)-methyltransferase CMT2 
 sly-m.5   CMT2   DNA (cytosine-5)-methyltransferase CMT2 
 sly-u.5   CMT4   DNA (cytosine-5)-methyltransferase 
 sly-u.5   CMT3   DNA (cytosine-5)-methyltransferase 3 
 sot-r.1   102580641   DNA (cytosine-5)-methyltransferase 1 
 sot-r.1   102589952   DNA (cytosine-5)-methyltransferase CMT2-like 
 nta-r.1   107762306   DNA (cytosine-5)-methyltransferase CMT2 
 nta-r.1   107770918   DNA (cytosine-5)-methyltransferase CMT3 
 nta-r.1   107774010   DNA (cytosine-5)-methyltransferase CMT3 
 ath-u.5   CMT2   chromomethylase 2 
 ath-u.5   CMT3   chromomethylase 3 
 gma-u.5   100798061   putative DNA (cytosine-5)-methyltransferase CMT1 
 gma-u.5   100799480   DNA (cytosine-5)-methyltransferase CMT3 
 gma-u.5   100817688   putative DNA (cytosine-5)-methyltransferase CMT1 
 bra-r.6   103873920   DNA (cytosine-5)-methyltransferase CMT3 
 bra-r.6   103857074   DNA (cytosine-5)-methyltransferase CMT2 
 bra-r.6   103871899   putative DNA (cytosine-5)-methyltransferase CMT1 
 vvi-u.5   100255190   DNA (cytosine-5)-methyltransferase CMT2 
 vvi-u.5   100252100   putative DNA (cytosine-5)-methyltransferase CMT1 
 vvi-u.5   100249359   DNA (cytosine-5)-methyltransferase CMT2 
 ppo-u.5   18096996   DNA (cytosine-5)-methyltransferase CMT2 
 ppo-u.5   7483264   DNA (cytosine-5)-methyltransferase CMT3 
 mtr-u.5   25496175   putative DNA (cytosine-5)-methyltransferase CMT1 
 mtr-u.5   25501554   DNA (cytosine-5)-methyltransferase CMT2 
 mtr-u.5   25496971   DNA (cytosine-5)-methyltransferase CMT3 
 ghi-r.1   121203351   DNA (cytosine-5)-methyltransferase CMT2-like 
 ghi-r.1   107938019   DNA (cytosine-5)-methyltransferase CMT3 
 ghi-r.1   107929437   DNA (cytosine-5)-methyltransferase CMT2 
 bna-r.1   106357856   DNA (cytosine-5)-methyltransferase CMT2 
 bna-r.1   106349859   putative DNA (cytosine-5)-methyltransferase CMT1 
 cit-r.1   102617543   putative DNA (cytosine-5)-methyltransferase CMT1 
 cit-r.1   102609368   DNA (cytosine-5)-methyltransferase CMT2-like 
 cit-r.1   102618592   DNA (cytosine-5)-methyltransferase CMT3-like 
 osa-u.5   4338140   DNA (cytosine-5)-methyltransferase CMT2-like 
 osa-u.5   4347954   DNA (cytosine-5)-methyltransferase CMT3-like 
 zma-u.5   met2   DNA methyltransferase2 
 zma-u.5   met5   DNA methyl transferase5 
 tae-r.2   123085496   DNA (cytosine-5)-methyltransferase CMT2 
 tae-r.2   123131626   DNA (cytosine-5)-methyltransferase CMT3 
 hvu-r.1   123400990   DNA (cytosine-5)-methyltransferase 1-like 
 hvu-r.1   123448977   DNA (cytosine-5)-methyltransferase CMT2-like 
 sbi-r.1   8058269   DNA (cytosine-5)-methyltransferase CMT2 
 sbi-r.1   8063966   DNA (cytosine-5)-methyltransferase 1 
 sbi-r.1   8055427   DNA (cytosine-5)-methyltransferase 1 
 bdi-r.1   100823231   DNA (cytosine-5)-methyltransferase CMT2 
 bdi-r.1   100845813   DNA (cytosine-5)-methyltransferase CMT3 

close


Top 50 coexpressed genes to CMT2 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CMT2 (sly-u.5 coexpression data)

CoexMap"101267211"


slyCMT2 | Entrez gene ID : 101267211      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 5 2 3 2 3 3 3 2 3 3 2 3 2 2 2 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00270 [list] [network] Cysteine and methionine metabolism (118 genes)
GO BP
GO:0044027 [list] [network] negative regulation of gene expression via chromosomal CpG island methylation  (6 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0003886 [list] [network] DNA (cytosine-5-)-methyltransferase activity  (7 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (150 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1883 genes)  IEA  
Protein NP_001353596.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo_mito 3,  chlo 2,  mito 2,  cysk_nucl 2  (predict for NP_001353596.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001353596.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
CMT2
sly-r.6
for
CMT2
sly-m.5
for
CMT2
sly-u.5
for
CMT4
sly-u.5
for
CMT3
sot-r.1
for
102580641
sot-r.1
for
102589952
nta-r.1
for
107762306
nta-r.1
for
107770918
nta-r.1
for
107774010
ath-u.5
for
CMT2
ath-u.5
for
CMT3
gma-u.5
for
100798061
gma-u.5
for
100799480
gma-u.5
for
100817688
bra-r.6
for
103873920
bra-r.6
for
103857074
bra-r.6
for
103871899
vvi-u.5
for
100255190
vvi-u.5
for
100252100
vvi-u.5
for
100249359
ppo-u.5
for
18096996
ppo-u.5
for
7483264
mtr-u.5
for
25496175
mtr-u.5
for
25501554
mtr-u.5
for
25496971
ghi-r.1
for
121203351
ghi-r.1
for
107938019
ghi-r.1
for
107929437
bna-r.1
for
106357856
bna-r.1
for
106349859
cit-r.1
for
102617543
cit-r.1
for
102609368
cit-r.1
for
102618592
osa-u.5
for
4338140
osa-u.5
for
4347954
zma-u.5
for
met2
zma-u.5
for
met5
tae-r.2
for
123085496
tae-r.2
for
123131626
hvu-r.1
for
123400990
hvu-r.1
for
123448977
sbi-r.1
for
8058269
sbi-r.1
for
8063966
sbi-r.1
for
8055427
bdi-r.1
for
100823231
bdi-r.1
for
100845813


Ortholog ID: 1467
Species sly sly sly sot sot nta nta nta ath ath gma gma gma bra bra bra vvi vvi vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna cit cit cit osa osa zma zma tae hvu hvu sbi sbi sbi bdi bdi
Symbol CMT2 CMT4 CMT3 LOC102580641 LOC102589952 LOC107762306 LOC107770918 LOC107774010 CMT2 CMT3 LOC100798061 LOC100817688 LOC100818307 LOC103873920 LOC103857074 LOC103871899 LOC100252100 LOC100249359 LOC104882030 LOC18096996 LOC7483264 LOC25496870 LOC25497416 LOC25491491 LOC107929437 LOC107921173 LOC121205071 LOC106357856 LOC106349859 LOC102617543 LOC102609368 LOC102618592 LOC4338140 LOC4347954 met2 met5 LOC123092546 LOC123400990 LOC123448977 LOC8058269 LOC8063966 LOC8055427 LOC100823231 LOC100845808
Function* DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase DNA (cytosine-5)-methyltransferase 3 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase CMT2-like DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase CMT3 DNA (cytosine-5)-methyltransferase CMT3 chromomethylase 2 chromomethylase 3 putative DNA (cytosine-5)-methyltransferase CMT1 putative DNA (cytosine-5)-methyltransferase CMT1 DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase CMT3 DNA (cytosine-5)-methyltransferase CMT2 putative DNA (cytosine-5)-methyltransferase CMT1 putative DNA (cytosine-5)-methyltransferase CMT1 DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase CMT2-like DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase CMT3 putative DNA (cytosine-5)-methyltransferase CMT1 putative DNA (cytosine-5)-methyltransferase CMT1 DNA (cytosine-5)-methyltransferase CMT3 DNA (cytosine-5)-methyltransferase CMT2 putative DNA (cytosine-5)-methyltransferase CMT1 uncharacterized LOC121205071 DNA (cytosine-5)-methyltransferase CMT2 putative DNA (cytosine-5)-methyltransferase CMT1 putative DNA (cytosine-5)-methyltransferase CMT1 DNA (cytosine-5)-methyltransferase CMT2-like DNA (cytosine-5)-methyltransferase CMT3-like DNA (cytosine-5)-methyltransferase CMT2-like DNA (cytosine-5)-methyltransferase CMT3-like DNA methyltransferase2 DNA methyl transferase5 DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase 1-like DNA (cytosine-5)-methyltransferase CMT2-like DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase 1 DNA (cytosine-5)-methyltransferase CMT2 DNA (cytosine-5)-methyltransferase CMT3
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 3
sly00240 Pyrimidine metabolism 3
sly01232 Nucleotide metabolism 3
sly00270 Cysteine and methionine metabolism 2
sly00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
sot03410 Base excision repair 3
sot03420 Nucleotide excision repair 3
sot03440 Homologous recombination 3
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00061 Fatty acid biosynthesis 3
sot00620 Pyruvate metabolism 3
sot01200 Carbon metabolism 3
sot01212 Fatty acid metabolism 3
sot00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 3
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03082 ATP-dependent chromatin remodeling 3
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00591 Linoleic acid metabolism 3
bra00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 4
vvi04145 Phagosome 2
vvi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 4
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr00270 Cysteine and methionine metabolism 3
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 5
mtr00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 7
bna03420 Nucleotide excision repair 3
bna03430 Mismatch repair 3
bna00270 Cysteine and methionine metabolism 2
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 3
cit00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 6
zma00270 Cysteine and methionine metabolism 2
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 6
zma00270 Cysteine and methionine metabolism 2
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 4
sbi04120 Ubiquitin mediated proteolysis 3
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03440 Homologous recombination 3
sbi00270 Cysteine and methionine metabolism 2
sbi03082 ATP-dependent chromatin remodeling 2
sbi03030 DNA replication 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 5
bdi03082 ATP-dependent chromatin remodeling 4
bdi00270 Cysteine and methionine metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101267211 101244018 101265056 102580641 102589952 107762306 107770918 107774010 827640 843313 100798061 100817688 100818307 103873920 103857074 103871899 100252100 100249359 104882030 18096996 7483264 25496870 25497416 25491491 107929437 107921173 121205071 106357856 106349859 102617543 102609368 102618592 4338140 4347954 541827 542060 123092546 123400990 123448977 8058269 8063966 8055427 100823231 100845808
The preparation time of this page was 0.1 [sec].