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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101267437   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 sly-r.6   101267437   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 sot-r.1   102581658   protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic 
 nta-r.1   107824783   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like 
 nta-r.1   107770914   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 ath-u.5   EDA3   DnaJ/Hsp40 cysteine-rich domain superfamily protein 
 gma-u.5   100806490   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 gma-u.5   100305959   uncharacterized LOC100305959 
 bra-r.6   103867412   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 bra-r.6   103865361   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 vvi-u.5   100241679   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 ppo-u.5   7483265   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 mtr-u.5   11423900   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 ghi-r.1   107913392   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 ghi-r.1   107914283   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 ghi-r.1   107925475   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 bna-r.1   111210398   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like 
 bna-r.1   125600628   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like 
 bna-r.1   106447294   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like 
 cit-r.1   102618023   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 osa-u.5   4345779   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like 
 tae-r.2   123187168   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 tae-r.2   123051210   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 tae-r.2   123043356   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 hvu-r.1   123424551   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like 
 sbi-r.1   8083511   protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic 
 bdi-r.1   100825738   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 cre-r.1   CHLRE_11g475850v5   uncharacterized protein 

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Top 50 coexpressed genes to 101267437 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101267437 (sly-u.5 coexpression data)

CoexMap"101267437"


slyLOC101267437 | Entrez gene ID : 101267437    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa tae hvu sbi bdi cre zma
Paralog 2 1 2 1 2 2 1 1 1 3 3 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048564 [list] [network] photosystem I assembly  (7 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (632 genes)  IEA  
GO MF
GO:0047134 [list] [network] protein-disulfide reductase [NAD(P)H] activity  (9 genes)  IEA  
Protein XP_004228692.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_004228692.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004228692.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101267437
sly-r.6
for
101267437
sot-r.1
for
102581658
nta-r.1
for
107824783
nta-r.1
for
107770914
ath-u.5
for
EDA3
gma-u.5
for
100806490
gma-u.5
for
100305959
bra-r.6
for
103867412
bra-r.6
for
103865361
vvi-u.5
for
100241679
ppo-u.5
for
7483265
mtr-u.5
for
11423900
ghi-r.1
for
107913392
ghi-r.1
for
107914283
ghi-r.1
for
107925475
bna-r.1
for
111210398
bna-r.1
for
125600628
bna-r.1
for
106447294
cit-r.1
for
102618023
osa-u.5
for
4345779
tae-r.2
for
123187168
tae-r.2
for
123051210
tae-r.2
for
123043356
hvu-r.1
for
123424551
sbi-r.1
for
8083511
bdi-r.1
for
100825738
cre-r.1
for
CHLRE_11g475850v5


Ortholog ID: 6828
Species sly sot nta nta ath gma gma bra bra vvi ppo mtr ghi ghi ghi bna bna bna cit osa tae tae tae hvu sbi bdi cre
Symbol LOC101267437 LOC102581658 LOC107824783 LOC107770914 EDA3 LOC100806490 LOC100305959 LOC103867412 LOC103865361 LOC100241679 LOC7483265 LOC11423900 LOC107913392 LOC107914283 LOC107925475 LOC111210398 LOC125600628 LOC106447213 LOC102618023 LOC4345779 LOC123187168 LOC123051210 LOC123043356 LOC123424551 LOC8083511 LOC100825738 CHLRE_11g475850v5
Function* protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic DnaJ/Hsp40 cysteine-rich domain superfamily protein protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic uncharacterized LOC100305959 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae01200 Carbon metabolism 3
tae00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03015 mRNA surveillance pathway 3
tae03018 RNA degradation 2
tae00460 Cyanoamino acid metabolism 2
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
tae00460 Cyanoamino acid metabolism 2
tae00500 Starch and sucrose metabolism 2
tae00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 2
cre00240 Pyrimidine metabolism 2
cre00250 Alanine, aspartate and glutamate metabolism 2
cre01240 Biosynthesis of cofactors 2
cre00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101267437 102581658 107824783 107770914 818051 100806490 100305959 103867412 103865361 100241679 7483265 11423900 107913392 107914283 107925475 111210398 125600628 106447213 102618023 4345779 123187168 123051210 123043356 123424551 8083511 100825738 5727572
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