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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101268453   cellulose synthase-like protein E6 
 sly-r.6   101268453   cellulose synthase-like protein E6 
 sly-m.5   101268453   cellulose synthase-like protein E6 
 sly-u.5   101249189   cellulose synthase-like protein E1 
 sot-r.1   102591531   cellulose synthase-like protein E6 
 sot-r.1   102580721   cellulose synthase-like protein E1 
 sot-r.1   102591207   cellulose synthase-like protein E6 
 nta-r.1   107776103   cellulose synthase-like protein E6 
 nta-r.1   107787706   cellulose synthase-like protein E6 
 nta-r.1   107791679   cellulose synthase-like protein E1 
 ath-u.5   CSLE1   cellulose synthase like E1 
 gma-u.5   100815825   cellulose synthase-like protein E1 
 gma-u.5   100816849   cellulose synthase-like protein E6 
 gma-u.5   100779861   cellulose synthase-like protein E6 
 bra-r.6   103832717   cellulose synthase-like protein E1 
 bra-r.6   103868380   cellulose synthase-like protein E1 
 bra-r.6   103868381   cellulose synthase-like protein E1 
 vvi-u.5   100852513   cellulose synthase-like protein E6 
 vvi-u.5   100855281   cellulose synthase-like protein E6 
 vvi-u.5   100260762   cellulose synthase-like protein E6 
 ppo-u.5   7458470   cellulose synthase-like protein E6 
 ppo-u.5   7485116   transmembrane emp24 domain-containing protein p24beta2 
 mtr-u.5   11440534   cellulose synthase-like protein E1 
 mtr-u.5   11440140   cellulose synthase-like protein E1 
 ghi-r.1   107918220   cellulose synthase-like protein E1 
 ghi-r.1   107935218   cellulose synthase-like protein E1 
 ghi-r.1   107935220   cellulose synthase-like protein E1 
 bna-r.1   106361242   cellulose synthase-like protein E1 
 bna-r.1   111198147   cellulose synthase-like protein E1 
 bna-r.1   106392186   cellulose synthase-like protein E1 
 cit-r.1   102626095   cellulose synthase-like protein E1 
 cit-r.1   102618794   cellulose synthase-like protein E1 
 cit-r.1   102622658   cellulose synthase-like protein E6 
 osa-u.5   9269152   cellulose synthase-like protein E6 
 osa-u.5   4330583   cellulose synthase-like protein E2 
 osa-u.5   4347370   cellulose synthase-like protein E1 
 zma-u.5   100281504   uncharacterized LOC100281504 
 zma-u.5   103627673   cellulose synthase-like protein E2 
 tae-r.2   123112307   cellulose synthase-like protein E6 
 tae-r.2   123104081   cellulose synthase-like protein E6 
 hvu-r.1   123399155   cellulose synthase-like protein E6 
 hvu-r.1   123406278   cellulose synthase-like protein E2 
 sbi-r.1   8077714   cellulose synthase-like protein E2 
 sbi-r.1   8063748   cellulose synthase-like protein E6 
 sbi-r.1   8055827   cellulose synthase-like protein E6 
 bdi-r.1   100828798   cellulose synthase-like protein E2 
 bdi-r.1   100845624   cellulose synthase-like protein E6 

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Top 50 coexpressed genes to 101268453 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101268453 (sly-u.5 coexpression data)

CoexMap"101268453"


slyLOC101268453 | Entrez gene ID : 101268453    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 1 3 3 3 2 2 3 3 3 3 2 2 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009833 [list] [network] plant-type primary cell wall biogenesis  (30 genes)  IEA  
GO:0030244 [list] [network] cellulose biosynthetic process  (44 genes)  IEA  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (105 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (899 genes)  IEA  
GO MF
GO:0016760 [list] [network] cellulose synthase (UDP-forming) activity  (30 genes)  IEA  
Protein XP_010313949.1 [sequence] [blastp]
XP_010313950.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  vacu 3,  nucl_plas 3,  golg_plas 3,  E.R._plas 3  (predict for XP_010313949.1)
plas 6,  vacu 2,  extr 1,  E.R. 1,  golg 1  (predict for XP_010313950.1)
Subcellular
localization
TargetP
other 7  (predict for XP_010313949.1)
other 8  (predict for XP_010313950.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101268453
sly-r.6
for
101268453
sly-m.5
for
101268453
sly-u.5
for
101249189
sot-r.1
for
102591531
sot-r.1
for
102580721
sot-r.1
for
102591207
nta-r.1
for
107776103
nta-r.1
for
107787706
nta-r.1
for
107791679
ath-u.5
for
CSLE1
gma-u.5
for
100815825
gma-u.5
for
100816849
gma-u.5
for
100779861
bra-r.6
for
103832717
bra-r.6
for
103868380
bra-r.6
for
103868381
vvi-u.5
for
100852513
vvi-u.5
for
100855281
vvi-u.5
for
100260762
ppo-u.5
for
7458470
ppo-u.5
for
7485116
mtr-u.5
for
11440534
mtr-u.5
for
11440140
ghi-r.1
for
107918220
ghi-r.1
for
107935218
ghi-r.1
for
107935220
bna-r.1
for
106361242
bna-r.1
for
111198147
bna-r.1
for
106392186
cit-r.1
for
102626095
cit-r.1
for
102618794
cit-r.1
for
102622658
osa-u.5
for
9269152
osa-u.5
for
4330583
osa-u.5
for
4347370
zma-u.5
for
100281504
zma-u.5
for
103627673
tae-r.2
for
123112307
tae-r.2
for
123104081
hvu-r.1
for
123399155
hvu-r.1
for
123406278
sbi-r.1
for
8077714
sbi-r.1
for
8063748
sbi-r.1
for
8055827
bdi-r.1
for
100828798
bdi-r.1
for
100845624


Ortholog ID: 1475
Species sly sly sot sot sot nta nta nta ath gma gma gma bra bra bra vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit cit osa osa osa zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC101268453 LOC101249189 LOC102591531 LOC102580382 LOC102593575 LOC107776103 LOC107791679 LOC107803670 CSLE1 LOC100779861 LOC112999362 LOC100785532 LOC103832717 LOC103868380 LOC103868381 LOC100852513 LOC100250126 LOC7458470 LOC7485116 LOC11440534 LOC11440140 LOC107951165 LOC121203053 LOC121212539 LOC106361242 LOC106392186 LOC106412710 LOC102626095 LOC102618794 LOC102626979 LOC9269152 LOC4330583 LOC4347370 LOC100281504 LOC103627673 LOC123104081 LOC123138084 LOC123104079 LOC123399155 LOC123406278 LOC8077714 LOC8063748 LOC8055827 LOC100828798 LOC100845624
Function* cellulose synthase-like protein E6 cellulose synthase-like protein E1 cellulose synthase-like protein E6 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E6 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase like E1 cellulose synthase-like protein E6 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E6 cellulose synthase-like protein E6 cellulose synthase-like protein E6 transmembrane emp24 domain-containing protein p24beta2 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E6 cellulose synthase-like protein E6 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E6 cellulose synthase-like protein E2 cellulose synthase-like protein E1 uncharacterized LOC100281504 cellulose synthase-like protein E2 cellulose synthase-like protein E6 cellulose synthase-like protein E2 cellulose synthase-like protein E6 cellulose synthase-like protein E6 cellulose synthase-like protein E2 cellulose synthase-like protein E2 cellulose synthase-like protein E6 cellulose synthase-like protein E6 cellulose synthase-like protein E2 cellulose synthase-like protein E6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 4
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 3
sot00020 Citrate cycle (TCA cycle) 3
sot00620 Pyruvate metabolism 3
sot00785 Lipoic acid metabolism 3
sot01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 4
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 4
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta00071 Fatty acid degradation 2
nta00592 alpha-Linolenic acid metabolism 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta03060 Protein export 2
nta04145 Phagosome 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 2
bra04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
osa00564 Glycerophospholipid metabolism 2
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00250 Alanine, aspartate and glutamate metabolism 2
zma00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 3
tae00270 Cysteine and methionine metabolism 2
tae00280 Valine, leucine and isoleucine degradation 2
tae00290 Valine, leucine and isoleucine biosynthesis 2
tae00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 3
sbi00620 Pyruvate metabolism 3
sbi01200 Carbon metabolism 3
sbi00071 Fatty acid degradation 2
sbi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 3
bdi00941 Flavonoid biosynthesis 3
bdi04517 IgSF CAM signaling 2
bdi04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101268453 101249189 102591531 102580382 102593575 107776103 107791679 107803670 842035 100779861 112999362 100785532 103832717 103868380 103868381 100852513 100250126 7458470 7485116 11440534 11440140 107951165 121203053 121212539 106361242 106392186 106412710 102626095 102618794 102626979 9269152 4330583 4347370 100281504 103627673 123104081 123138084 123104079 123399155 123406278 8077714 8063748 8055827 100828798 100845624
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