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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103832717   cellulose synthase-like protein E1 
 ath-u.5   CSLE1   cellulose synthase like E1 
 gma-u.5   100815825   cellulose synthase-like protein E1 
 gma-u.5   100785532   cellulose synthase-like protein E1 
 gma-u.5   100816849   cellulose synthase-like protein E6 
 vvi-u.5   100855281   cellulose synthase-like protein E6 
 vvi-u.5   100852703   cellulose synthase-like protein E6 
 ppo-u.5   7485116   transmembrane emp24 domain-containing protein p24beta2 
 ppo-u.5   7458470   cellulose synthase-like protein E6 
 mtr-u.5   11440534   cellulose synthase-like protein E1 
 mtr-u.5   11440140   cellulose synthase-like protein E1 
 sly-u.5   101268453   cellulose synthase-like protein E6 
 sly-u.5   101249189   cellulose synthase-like protein E1 
 osa-u.5   9269152   cellulose synthase-like protein E6 
 osa-u.5   4347370   cellulose synthase-like protein E1 
 osa-u.5   4330583   cellulose synthase-like protein E2 
 zma-u.5   103627673   cellulose synthase-like protein E2 
 zma-u.5   100281504   uncharacterized LOC100281504 

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Top 50 coexpressed genes to 103832717 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103832717 (bra-r.6 coexpression data)

CoexMap"103832717"


braLOC103832717 | Entrez gene ID : 103832717    
Species bra ath gma vvi ppo mtr sly osa zma sbi nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 3 2 2 2 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009833 [list] [network] plant-type primary cell wall biogenesis  (33 genes)  IEA  
GO:0030244 [list] [network] cellulose biosynthetic process  (51 genes)  IEA  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (170 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (1422 genes)  IEA  
GO MF
GO:0051753 [list] [network] mannan synthase activity  (32 genes)  IEA  
GO:0016760 [list] [network] cellulose synthase (UDP-forming) activity  (33 genes)  IEA  
Protein XP_018509449.1 [sequence] [blastp]
XP_033133650.1 [sequence] [blastp]
XP_033133651.1 [sequence] [blastp]
XP_033133652.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  E.R. 1  (predict for XP_018509449.1)
plas 8,  E.R. 1  (predict for XP_033133650.1)
plas 8,  E.R. 1  (predict for XP_033133651.1)
chlo 6,  nucl 1,  E.R. 1  (predict for XP_033133652.1)
Subcellular
localization
TargetP
other 9,  mito 6  (predict for XP_018509449.1)
other 9,  mito 6  (predict for XP_033133650.1)
other 9,  mito 6  (predict for XP_033133651.1)
other 9,  mito 6  (predict for XP_033133652.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103832717

.
ath-u.5
for
CSLE1

.
gma-u.5
for
100815825

.
gma-u.5
for
100785532

.
gma-u.5
for
100816849

.
vvi-u.5
for
100855281

.
vvi-u.5
for
100852703

.
ppo-u.5
for
7485116

.
ppo-u.5
for
7458470

.
mtr-u.5
for
11440534

.
mtr-u.5
for
11440140

.
sly-u.5
for
101268453

.
sly-u.5
for
101249189

.
osa-u.5
for
9269152

.
osa-u.5
for
4347370

.
osa-u.5
for
4330583

.
zma-u.5
for
103627673

.
zma-u.5
for
100281504

.


Ortholog ID: 1475
Species ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi nta nta
Symbol CSLE1 LOC100779861 LOC100785532 LOC101249189 LOC101268453 LOC4330583 LOC9269152 LOC103627673 LOC100281504 LOC103832717 LOC103868380 LOC100250126 LOC100852513 LOC7458470 LOC7485116 LOC11440140 LOC11440534 LOC123138084 LOC123104079 LOC123406278 LOC123399155 LOC107951165 LOC121203053 LOC106392186 LOC106361242 LOC8063748 LOC8055827 LOC102593575 LOC102591531 LOC102626095 LOC102626979 LOC100845624 LOC107803670 LOC107791679
Function* cellulose synthase like E1 cellulose synthase-like protein E6 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E6 cellulose synthase-like protein E2 cellulose synthase-like protein E6 cellulose synthase-like protein E2 uncharacterized LOC100281504 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E6 cellulose synthase-like protein E6 cellulose synthase-like protein E6 transmembrane emp24 domain-containing protein p24beta2 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E2 cellulose synthase-like protein E6 cellulose synthase-like protein E2 cellulose synthase-like protein E6 cellulose synthase-like protein E1 cellulose synthase-like protein E6 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E6 cellulose synthase-like protein E6 cellulose synthase-like protein E1 cellulose synthase-like protein E6 cellulose synthase-like protein E1 cellulose synthase-like protein E1 cellulose synthase-like protein E6 cellulose synthase-like protein E1 cellulose synthase-like protein E1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 4
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
osa00564 Glycerophospholipid metabolism 2
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00250 Alanine, aspartate and glutamate metabolism 2
zma00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 2
bra04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 3
tae00270 Cysteine and methionine metabolism 2
tae00280 Valine, leucine and isoleucine degradation 2
tae00290 Valine, leucine and isoleucine biosynthesis 2
tae00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 3
sbi00620 Pyruvate metabolism 3
sbi01200 Carbon metabolism 3
sbi00071 Fatty acid degradation 2
sbi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00480 Glutathione metabolism 4
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 3
sot00020 Citrate cycle (TCA cycle) 3
sot00620 Pyruvate metabolism 3
sot00785 Lipoic acid metabolism 3
sot01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 3
bdi00941 Flavonoid biosynthesis 3
bdi04517 IgSF CAM signaling 2
bdi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta03060 Protein export 2
nta04145 Phagosome 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta00071 Fatty acid degradation 2
nta00592 alpha-Linolenic acid metabolism 2
nta01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842035 100779861 100785532 101249189 101268453 4330583 9269152 103627673 100281504 103832717 103868380 100250126 100852513 7458470 7485116 11440140 11440534 123138084 123104079 123406278 123399155 107951165 121203053 106392186 106361242 8063748 8055827 102593575 102591531 102626095 102626979 100845624 107803670 107791679
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