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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102580086   40S ribosomal protein S3-3-like 
 sot-r.1   102599656   40S ribosomal protein S3-2-like 
 sot-r.1   102580417   40S ribosomal protein S3-3-like 
 sly-u.5   101244604   small ribosomal subunit protein uS3x 
 sly-u.5   101244892   small ribosomal subunit protein uS3x-like 
 sly-u.5   101257282   small ribosomal subunit protein uS3y 
 nta-r.1   107831973   small ribosomal subunit protein uS3x-like 
 nta-r.1   107795696   small ribosomal subunit protein uS3x 
 nta-r.1   107813032   small ribosomal subunit protein uS3x 
 ath-u.5   AT2G31610   Ribosomal protein S3 family protein 
 ath-u.5   AT3G53870   Ribosomal protein S3 family protein 
 ath-u.5   AT5G35530   Ribosomal protein S3 family protein 
 gma-u.5   100800747   40S ribosomal protein S3-3 
 gma-u.5   100808705   40S ribosomal protein S3 
 bra-r.6   103865126   40S ribosomal protein S3-2 
 bra-r.6   103857392   40S ribosomal protein S3-2 
 vvi-u.5   100261737   small ribosomal subunit protein uS3x 
 vvi-u.5   100259512   small ribosomal subunit protein uS3x 
 ppo-u.5   7483474   40S ribosomal protein S3-3 
 ppo-u.5   7463768   40S ribosomal protein S3-3 
 ppo-u.5   7474877   40S ribosomal protein S3-3 
 mtr-u.5   25485537   40S ribosomal protein S3-3 
 mtr-u.5   11440250   40S ribosomal protein S3-1 
 mtr-u.5   11441628   40S ribosomal protein S3-1 
 ghi-r.1   107958848   40S ribosomal protein S3-3 
 ghi-r.1   107958777   40S ribosomal protein S3-2 
 ghi-r.1   107932229   40S ribosomal protein S3-3 
 bna-r.1   111205477   40S ribosomal protein S3-2 
 bna-r.1   106453640   40S ribosomal protein S3-2-like 
 bna-r.1   106451400   40S ribosomal protein S3-2-like 
 cit-r.1   102611929   40S ribosomal protein S3-3 
 cit-r.1   102623282   40S ribosomal protein S3-3 
 osa-u.5   4343869   40S ribosomal protein S3-1 
 osa-u.5   4333308   small ribosomal subunit protein uS3y 
 zma-u.5   100282772   40S ribosomal protein S3-like 
 zma-u.5   100194112   40S ribosomal protein S3-1 
 zma-u.5   100274348   40S ribosomal protein S3-1 
 tae-r.2   123044244   40S ribosomal protein S3-3 
 tae-r.2   123052121   40S ribosomal protein S3-3 
 tae-r.2   123060375   40S ribosomal protein S3-3-like 
 hvu-r.1   123413461   40S ribosomal protein S3-3 
 hvu-r.1   123425352   40S ribosomal protein S3-3-like 
 sbi-r.1   8069647   40S ribosomal protein S3-3 
 sbi-r.1   8079175   40S ribosomal protein S3-3 
 bdi-r.1   100829722   40S ribosomal protein S3-3 
 bdi-r.1   100845739   40S ribosomal protein S3-3 
 cre-r.1   CHLRE_02g102250v5   ribosomal protein S3 

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Top 50 coexpressed genes to 102580086 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102580086 (sot-r.1 coexpression data)

CoexMap"102577644"


sotLOC102577644 | Entrez gene ID : 102577644    
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 3 3 3 2 2 2 3 3 3 3 2 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03010 [list] [network] Ribosome (406 genes)
GO BP
GO CC
GO MF
Protein NP_001275434.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  plas 2,  nucl 1,  chlo 1,  pero 1,  cysk_nucl 1  (predict for NP_001275434.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001275434.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102580086
sot-r.1
for
102599656
sot-r.1
for
102580417
sly-u.5
for
101244604
sly-u.5
for
101244892
sly-u.5
for
101257282
nta-r.1
for
107831973
nta-r.1
for
107795696
nta-r.1
for
107813032
ath-u.5
for
AT2G31610
ath-u.5
for
AT3G53870
ath-u.5
for
AT5G35530
gma-u.5
for
100800747
gma-u.5
for
100808705
bra-r.6
for
103865126
bra-r.6
for
103857392
vvi-u.5
for
100261737
vvi-u.5
for
100259512
ppo-u.5
for
7483474
ppo-u.5
for
7463768
ppo-u.5
for
7474877
mtr-u.5
for
25485537
mtr-u.5
for
11440250
mtr-u.5
for
11441628
ghi-r.1
for
107958848
ghi-r.1
for
107958777
ghi-r.1
for
107932229
bna-r.1
for
111205477
bna-r.1
for
106453640
bna-r.1
for
106451400
cit-r.1
for
102611929
cit-r.1
for
102623282
osa-u.5
for
4343869
osa-u.5
for
4333308
zma-u.5
for
100282772
zma-u.5
for
100194112
zma-u.5
for
100274348
tae-r.2
for
123044244
tae-r.2
for
123052121
tae-r.2
for
123060375
hvu-r.1
for
123413461
hvu-r.1
for
123425352
sbi-r.1
for
8069647
sbi-r.1
for
8079175
bdi-r.1
for
100829722
bdi-r.1
for
100845739
cre-r.1
for
CHLRE_02g102250v5


Ortholog ID: 1489
Species sot sot sot sly sly sly nta nta nta ath ath ath gma gma bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC102580086 LOC102599656 LOC102580417 LOC101244604 LOC101244892 LOC101257282 LOC107831973 LOC107813032 LOC107819043 AT2G31610 AT3G53870 AT5G35530 LOC100808705 LOC100499737 LOC103865126 LOC103868229 LOC100261737 LOC100259512 LOC7483474 LOC7463768 LOC7491996 LOC11440250 LOC11441628 LOC11414550 LOC107958848 LOC107932229 LOC107907112 LOC106392854 LOC106437727 LOC106437728 LOC102611929 LOC102623282 LOC4343869 LOC4333308 LOC100282772 LOC100194112 LOC100274348 LOC123052121 LOC123187980 LOC543076 LOC123413461 LOC123425352 LOC8069647 LOC8079175 LOC100829722 LOC100845739 CHLRE_02g102250v5
Function* 40S ribosomal protein S3-3-like 40S ribosomal protein S3-2-like 40S ribosomal protein S3-3-like small ribosomal subunit protein uS3x small ribosomal subunit protein uS3x-like small ribosomal subunit protein uS3y small ribosomal subunit protein uS3x-like small ribosomal subunit protein uS3x small ribosomal subunit protein uS3z Ribosomal protein S3 family protein Ribosomal protein S3 family protein Ribosomal protein S3 family protein 40S ribosomal protein S3 40S ribosomal protein S3 40S ribosomal protein S3-2 40S ribosomal protein S3-2 small ribosomal subunit protein uS3x small ribosomal subunit protein uS3x 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-1 40S ribosomal protein S3-1 40S ribosomal protein S3-1 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-2 40S ribosomal protein S3-2-like 40S ribosomal protein S3-2 40S ribosomal protein S3-2 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-1 small ribosomal subunit protein uS3y 40S ribosomal protein S3-like 40S ribosomal protein S3-1 40S ribosomal protein S3-1 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-3-like 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-3 40S ribosomal protein S3-3 ribosomal protein S3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
sot03008 Ribosome biogenesis in eukaryotes 3
sot03013 Nucleocytoplasmic transport 3
sot03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 17
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
osa04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03013 Nucleocytoplasmic transport 3
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102580086 102599656 102580417 101244604 101244892 101257282 107831973 107813032 107819043 817719 824554 833518 100808705 100499737 103865126 103868229 100261737 100259512 7483474 7463768 7491996 11440250 11441628 11414550 107958848 107932229 107907112 106392854 106437727 106437728 102611929 102623282 4343869 4333308 100282772 100194112 100274348 123052121 123187980 543076 123413461 123425352 8069647 8079175 100829722 100845739 5725348
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