Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102578407   WD repeat-containing protein 36 
 sly-u.5   101254131   uncharacterized LOC101254131 
 nta-r.1   107792024   uncharacterized LOC107792024 
 nta-r.1   142176321   U3 small nucleolar RNA-associated protein 21 homolog 
 ath-u.5   AT4G04940   transducin family protein / WD-40 repeat family protein 
 gma-u.5   100798946   WD repeat-containing protein 36 
 gma-u.5   100795420   WD repeat-containing protein 36 
 bra-r.6   103858678   U3 small nucleolar RNA-associated protein 21 homolog 
 vvi-u.5   100266615   U3 small nucleolar RNA-associated protein 21 homolog 
 ppo-u.5   7487225   U3 small nucleolar RNA-associated protein 21 homolog 
 mtr-u.5   25497027   U3 small nucleolar RNA-associated protein 21 homolog 
 ghi-r.1   107926233   WD repeat-containing protein 36 
 ghi-r.1   121204867   WD repeat-containing protein 36 
 bna-r.1   106410441   U3 small nucleolar RNA-associated protein 21 homolog 
 bna-r.1   106438744   U3 small nucleolar RNA-associated protein 21 homolog 
 cit-r.1   102623825   U3 small nucleolar RNA-associated protein 21 homolog 
 osa-u.5   9270402   U3 small nucleolar RNA-associated protein 21 homolog 
 zma-u.5   100280230   transducin family protein / WD-40 repeat family protein 
 tae-r.2   123160596   U3 small nucleolar RNA-associated protein 21 homolog 
 tae-r.2   123164973   U3 small nucleolar RNA-associated protein 21 homolog 
 tae-r.2   123149536   U3 small nucleolar RNA-associated protein 21 homolog 
 hvu-r.1   123409890   U3 small nucleolar RNA-associated protein 21 homolog 
 sbi-r.1   8058405   U3 small nucleolar RNA-associated protein 21 homolog 
 bdi-r.1   100833468   U3 small nucleolar RNA-associated protein 21 homolog 
 cre-r.1   CHLRE_10g466250v5   uncharacterized protein 

close


Top 50 coexpressed genes to 102578407 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102578407 (sot-r.1 coexpression data)

CoexMap"102578407"


sotLOC102578407 | Entrez gene ID : 102578407      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 2 1 1 1 1 2 2 1 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03008 [list] [network] Ribosome biogenesis in eukaryotes (88 genes)
GO BP
GO:0006364 [list] [network] rRNA processing  (174 genes)  IEA  
GO CC
GO:0034388 [list] [network] Pwp2p-containing subcomplex of 90S preribosome  (6 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (45 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006345412.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 2  (predict for XP_006345412.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006345412.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102578407
sly-u.5
for
101254131
nta-r.1
for
107792024
nta-r.1
for
142176321
ath-u.5
for
AT4G04940
gma-u.5
for
100798946
gma-u.5
for
100795420
bra-r.6
for
103858678
vvi-u.5
for
100266615
ppo-u.5
for
7487225
mtr-u.5
for
25497027
ghi-r.1
for
107926233
ghi-r.1
for
121204867
bna-r.1
for
106410441
bna-r.1
for
106438744
cit-r.1
for
102623825
osa-u.5
for
9270402
zma-u.5
for
100280230
tae-r.2
for
123160596
tae-r.2
for
123164973
tae-r.2
for
123149536
hvu-r.1
for
123409890
sbi-r.1
for
8058405
bdi-r.1
for
100833468
cre-r.1
for
CHLRE_10g466250v5


Ortholog ID: 10167
Species sot sly nta nta ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102578407 LOC101254131 LOC107792024 LOC142176321 AT4G04940 LOC100798946 LOC100795420 LOC103858678 LOC100266615 LOC7487225 LOC25497027 LOC107926233 LOC121204867 LOC106410441 LOC106438744 LOC102623825 LOC9270402 LOC100280230 LOC123160596 LOC123164973 LOC123149536 LOC123409890 LOC8058405 LOC100833468 CHLRE_10g466250v5
Function* WD repeat-containing protein 36 uncharacterized LOC101254131 uncharacterized LOC107792024 U3 small nucleolar RNA-associated protein 21 homolog transducin family protein / WD-40 repeat family protein WD repeat-containing protein 36 WD repeat-containing protein 36 U3 small nucleolar RNA-associated protein 21 homolog U3 small nucleolar RNA-associated protein 21 homolog U3 small nucleolar RNA-associated protein 21 homolog U3 small nucleolar RNA-associated protein 21 homolog WD repeat-containing protein 36 WD repeat-containing protein 36 U3 small nucleolar RNA-associated protein 21 homolog U3 small nucleolar RNA-associated protein 21 homolog U3 small nucleolar RNA-associated protein 21 homolog U3 small nucleolar RNA-associated protein 21 homolog transducin family protein / WD-40 repeat family protein U3 small nucleolar RNA-associated protein 21 homolog U3 small nucleolar RNA-associated protein 21 homolog U3 small nucleolar RNA-associated protein 21 homolog U3 small nucleolar RNA-associated protein 21 homolog U3 small nucleolar RNA-associated protein 21 homolog U3 small nucleolar RNA-associated protein 21 homolog uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
ath03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03020 RNA polymerase 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102578407 101254131 107792024 142176321 825833 100798946 100795420 103858678 100266615 7487225 25497027 107926233 121204867 106410441 106438744 102623825 9270402 100280230 123160596 123164973 123149536 123409890 8058405 100833468 5724008
The preparation time of this page was 0.1 [sec].