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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102578504   pentatricopeptide repeat-containing protein At4g30700 
 ath-u.5   MEF29   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100795074   pentatricopeptide repeat-containing protein At4g30700 
 vvi-u.5   100243341   pentatricopeptide repeat-containing protein At4g30700 
 ppo-u.5   7465970   pentatricopeptide repeat-containing protein At4g30700 
 mtr-u.5   11437873   pentatricopeptide repeat-containing protein At4g30700 
 zma-u.5   103637971   pentatricopeptide repeat-containing protein At4g30700 

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Top 50 coexpressed genes to 102578504 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102578504 (sot-r.1 coexpression data)

CoexMap"102578504"


sotLOC102578504 | Entrez gene ID : 102578504      
Species sot ath gma vvi ppo mtr zma hvu tae cit sbi sly ghi cre bna nta bdi bra osa
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (768 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006343621.1 [sequence] [blastp]
XP_006343622.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_006343621.1)
chlo 9  (predict for XP_006343622.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_006343621.1)
mito 7  (predict for XP_006343622.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102578504

.
ath-u.5
for
MEF29

.
gma-u.5
for
100795074

.
vvi-u.5
for
100243341

.
ppo-u.5
for
7465970

.
mtr-u.5
for
11437873

.
zma-u.5
for
103637971

.


Ortholog ID: 9054
Species ath gma zma bra bra vvi ppo mtr hvu ghi ghi bna bna sot cit bdi nta nta
Symbol MEF29 LOC100795074 LOC103637971 LOC103852396 LOC103862163 LOC100243341 LOC7465970 LOC11437873 LOC123411988 LOC107907452 LOC107958682 LOC106411022 LOC106393980 LOC102578504 LOC102621469 LOC100846566 LOC107769134 LOC107806629
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700-like pentatricopeptide repeat-containing protein At4g30700-like pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700 pentatricopeptide repeat-containing protein At4g30700-like pentatricopeptide repeat-containing protein At4g30700-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
sot03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
cit00240 Pyrimidine metabolism 2
cit00480 Glutathione metabolism 2
cit01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829193 100795074 103637971 103852396 103862163 100243341 7465970 11437873 123411988 107907452 107958682 106411022 106393980 102578504 102621469 100846566 107769134 107806629
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