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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102578685   60S ribosomal protein L39-3 
 sot-r.1   102600770   60S ribosomal protein L39-3-like 
 sot-r.1   102586829   60S ribosomal protein L39-3-like 
 sly-u.5   101256892   large ribosomal subunit protein eL39x 
 sly-u.5   101247403   large ribosomal subunit protein eL39x 
 ath-u.5   AT2G25210   Ribosomal protein L39 family protein 
 ath-u.5   AT3G02190   Ribosomal protein L39 family protein 
 ath-u.5   AT4G31985   Ribosomal protein L39 family protein 
 gma-u.5   100807176   60S ribosomal protein L39 
 gma-u.5   100818289   60S ribosomal protein L39 
 gma-u.5   100801450   60S ribosomal protein L39 
 bra-r.6   103864616   60S ribosomal protein L39-1 
 bra-r.6   103870929   60S ribosomal protein L39-2 
 bra-r.6   103834576   60S ribosomal protein L39-1 
 ppo-u.5   18100582   60S ribosomal protein L39 
 ppo-u.5   7493414   60S ribosomal protein L39 
 mtr-u.5   11435427   60S ribosomal protein L39-3 
 mtr-u.5   25481949   60S ribosomal protein L39-3 
 ghi-r.1   107893420   60S ribosomal protein L39-3 
 ghi-r.1   107937953   60S ribosomal protein L39-3 
 ghi-r.1   107948712   60S ribosomal protein L39 
 bna-r.1   125580576   60S ribosomal protein L39-1 
 bna-r.1   125609549   60S ribosomal protein L39-2 
 cit-r.1   102623420   60S ribosomal protein L39-3 
 cit-r.1   102617787   60S ribosomal protein L39-3 
 cit-r.1   127901240   60S ribosomal protein L39-3 
 osa-u.5   9268459   60S ribosomal protein L39-3-like 
 osa-u.5   4331011   60S ribosomal protein L39 
 osa-u.5   4331014   60S ribosomal protein L39 
 zma-u.5   542444   ribosomal protein L39 
 zma-u.5   118473275   60S ribosomal protein L39-like 
 zma-u.5   100280595   60S ribosomal protein L39-like 
 tae-r.2   606340   60S ribosomal protein L39 
 tae-r.2   123145928   60S ribosomal protein L39 
 tae-r.2   123139148   60S ribosomal protein L39 
 sbi-r.1   8084645   60S ribosomal protein L39 
 sbi-r.1   8065406   60S ribosomal protein L39 
 bdi-r.1   100829077   60S ribosomal protein L39 
 bdi-r.1   100827493   60S ribosomal protein L39 
 bdi-r.1   100840840   60S ribosomal protein L39 

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Top 50 coexpressed genes to 102578685 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102578685 (sot-r.1 coexpression data)

CoexMap"102578685"


sotLOC102578685 | Entrez gene ID : 102578685    
Species sot sly ath gma bra ppo mtr ghi bna cit osa zma tae sbi bdi vvi cre nta hvu
Paralog 3 2 3 3 3 2 2 3 2 3 3 3 3 2 3 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03010 [list] [network] Ribosome (406 genes)
GO BP
GO:0006412 [list] [network] translation  (522 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (103 genes)  IEA  
GO:0005840 [list] [network] ribosome  (378 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (377 genes)  IEA  
Protein XP_006338352.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 5,  cyto 5,  nucl 4  (predict for XP_006338352.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_006338352.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102578685
sot-r.1
for
102600770
sot-r.1
for
102586829
sly-u.5
for
101256892
sly-u.5
for
101247403
ath-u.5
for
AT2G25210
ath-u.5
for
AT3G02190
ath-u.5
for
AT4G31985
gma-u.5
for
100807176
gma-u.5
for
100818289
gma-u.5
for
100801450
bra-r.6
for
103864616
bra-r.6
for
103870929
bra-r.6
for
103834576
ppo-u.5
for
18100582
ppo-u.5
for
7493414
mtr-u.5
for
11435427
mtr-u.5
for
25481949
ghi-r.1
for
107893420
ghi-r.1
for
107937953
ghi-r.1
for
107948712
bna-r.1
for
125580576
bna-r.1
for
125609549
cit-r.1
for
102623420
cit-r.1
for
102617787
cit-r.1
for
127901240
osa-u.5
for
9268459
osa-u.5
for
4331011
osa-u.5
for
4331014
zma-u.5
for
542444
zma-u.5
for
118473275
zma-u.5
for
100280595
tae-r.2
for
606340
tae-r.2
for
123145928
tae-r.2
for
123139148
sbi-r.1
for
8084645
sbi-r.1
for
8065406
bdi-r.1
for
100829077
bdi-r.1
for
100827493
bdi-r.1
for
100840840


Ortholog ID: 1911
Species sot sot sot sly sly ath ath ath gma gma gma bra bra ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit cit osa osa osa zma zma zma tae tae tae sbi sbi bdi bdi bdi
Symbol LOC102578685 LOC102600770 LOC102586829 LOC101256892 LOC101247403 AT2G25210 AT3G02190 AT4G31985 LOC100807176 LOC100818289 LOC100779071 LOC103864616 LOC103862101 LOC18100582 LOC7493414 LOC18107794 LOC11435427 LOC25481949 LOC107890469 LOC107900491 LOC121204814 LOC125580576 LOC106449937 LOC106449944 LOC102623420 LOC102617787 LOC127901240 LOC9268459 LOC4331011 LOC4331014 LOC118473275 LOC100280595 LOC103654171 LOC606340 LOC123139148 LOC123150917 LOC8084645 LOC8065406 LOC100829077 LOC100827493 LOC100840840
Function* 60S ribosomal protein L39-3 60S ribosomal protein L39-3-like 60S ribosomal protein L39-3-like large ribosomal subunit protein eL39x large ribosomal subunit protein eL39x Ribosomal protein L39 family protein Ribosomal protein L39 family protein Ribosomal protein L39 family protein 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39-1 60S ribosomal protein L39-1 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39 60S ribosomal protein L39-1 60S ribosomal protein L39-1 60S ribosomal protein L39-1 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39-3 60S ribosomal protein L39-3-like 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39-like 60S ribosomal protein L39-like 60S ribosomal protein L39-like 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39 60S ribosomal protein L39
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03020 RNA polymerase 3
ath03420 Nucleotide excision repair 3
ath03018 RNA degradation 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma03050 Proteasome 2
gma03440 Homologous recombination 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna00220 Arginine biosynthesis 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna00270 Cysteine and methionine metabolism 4
bna00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 15
bna00220 Arginine biosynthesis 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00270 Cysteine and methionine metabolism 2
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 17
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102578685 102600770 102586829 101256892 101247403 817059 820350 829329 100807176 100818289 100779071 103864616 103862101 18100582 7493414 18107794 11435427 25481949 107890469 107900491 121204814 125580576 106449937 106449944 102623420 102617787 127901240 9268459 4331011 4331014 118473275 100280595 103654171 606340 123139148 123150917 8084645 8065406 100829077 100827493 100840840
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