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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102579906   AP-3 complex subunit sigma-like 
 sot-r.1   102586463   AP-3 complex subunit sigma-like 
 sly-u.5   101266464   AP-3 complex subunit sigma-like 
 sly-u.5   101260097   AP-3 complex subunit sigma-like 
 nta-r.1   107769874   AP-3 complex subunit sigma 
 nta-r.1   107789992   AP-3 complex subunit sigma-like 
 nta-r.1   107814722   AP-3 complex subunit sigma 
 ath-u.5   AT3G50860   Clathrin adaptor complex small chain family protein 
 gma-u.5   100781795   clathrin adaptor complex small subunit superfamily protein 
 gma-u.5   100306517   uncharacterized LOC100306517 
 vvi-u.5   100254708   AP-3 complex subunit sigma 
 ppo-u.5   18099276   AP-3 complex subunit sigma 
 ppo-u.5   7473178   AP-3 complex subunit sigma 
 mtr-u.5   11411334   AP-3 complex subunit sigma 
 ghi-r.1   121215274   AP-3 complex subunit sigma 
 ghi-r.1   107945750   AP-3 complex subunit sigma 
 ghi-r.1   107926769   AP-3 complex subunit sigma 
 bna-r.1   106425622   AP-3 complex subunit sigma 
 bna-r.1   106444315   AP-3 complex subunit sigma 
 cit-r.1   102626246   AP-3 complex subunit sigma 
 osa-u.5   4332139   AP-3 complex subunit sigma 
 zma-u.5   100191763   AP-3 complex subunit sigma-2 
 tae-r.2   123092875   AP-3 complex subunit sigma 
 tae-r.2   123098158   AP-3 complex subunit sigma 
 tae-r.2   123085257   AP-3 complex subunit sigma 
 hvu-r.1   123449236   AP-3 complex subunit sigma 
 sbi-r.1   8085244   AP-3 complex subunit sigma 
 bdi-r.1   100838420   AP-3 complex subunit sigma 

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Top 50 coexpressed genes to 102579906 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102579906 (sot-r.1 coexpression data)

CoexMap"102579906"


sotLOC102579906 | Entrez gene ID : 102579906    
Species sot sly nta ath gma vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi bra cre
Paralog 2 2 3 1 2 1 2 1 3 2 1 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot04142 [list] [network] Lysosome (87 genes)
GO BP
GO:0006896 [list] [network] Golgi to vacuole transport  (5 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (245 genes)  IEA  
GO CC
GO:0030123 [list] [network] AP-3 adaptor complex  (3 genes)  IEA  
GO:0030117 [list] [network] membrane coat  (69 genes)  IEA  
GO MF
Protein XP_006340623.1 [sequence] [blastp]
XP_006340624.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 3,  cyto_nucl 3  (predict for XP_006340623.1)
nucl 4,  cyto 3,  mito 2,  chlo 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_006340624.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_006340623.1)
other 6,  mito 3  (predict for XP_006340624.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102579906
sot-r.1
for
102586463
sly-u.5
for
101266464
sly-u.5
for
101260097
nta-r.1
for
107769874
nta-r.1
for
107789992
nta-r.1
for
107814722
ath-u.5
for
AT3G50860
gma-u.5
for
100781795
gma-u.5
for
100306517
vvi-u.5
for
100254708
ppo-u.5
for
18099276
ppo-u.5
for
7473178
mtr-u.5
for
11411334
ghi-r.1
for
121215274
ghi-r.1
for
107945750
ghi-r.1
for
107926769
bna-r.1
for
106425622
bna-r.1
for
106444315
cit-r.1
for
102626246
osa-u.5
for
4332139
zma-u.5
for
100191763
tae-r.2
for
123092875
tae-r.2
for
123098158
tae-r.2
for
123085257
hvu-r.1
for
123449236
sbi-r.1
for
8085244
bdi-r.1
for
100838420


Ortholog ID: 6899
Species sot sot sly sly nta nta nta ath gma gma vvi ppo ppo mtr ghi ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC102579906 LOC102586463 LOC101266464 LOC101260097 LOC107769874 LOC107814722 LOC107811169 AT3G50860 LOC100781795 LOC100306517 LOC100254708 LOC18099276 LOC7473178 LOC11411334 LOC121215274 LOC107945750 LOC107909398 LOC106425622 LOC106444315 LOC102626246 LOC4332139 LOC100191763 LOC123092875 LOC123098158 LOC123085257 LOC123449236 LOC8085244 LOC100838420
Function* AP-3 complex subunit sigma-like AP-3 complex subunit sigma-like AP-3 complex subunit sigma-like AP-3 complex subunit sigma-like AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma Clathrin adaptor complex small chain family protein clathrin adaptor complex small subunit superfamily protein uncharacterized LOC100306517 AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma-2 AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma AP-3 complex subunit sigma
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
nta04142 Lysosome 2
nta04144 Endocytosis 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01240 Biosynthesis of cofactors 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta04142 Lysosome 2
nta04144 Endocytosis 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 3
gma00513 Various types of N-glycan biosynthesis 3
gma03040 Spliceosome 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 2
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 2
ghi04142 Lysosome 2
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna04122 Sulfur relay system 2
bna04142 Lysosome 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna04122 Sulfur relay system 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 3
osa03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 4
tae04142 Lysosome 3
tae00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00562 Inositol phosphate metabolism 3
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 4
tae04142 Lysosome 3
tae00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03050 Proteasome 2
bdi03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102579906 102586463 101266464 101260097 107769874 107814722 107811169 824250 100781795 100306517 100254708 18099276 7473178 11411334 121215274 107945750 107909398 106425622 106444315 102626246 4332139 100191763 123092875 123098158 123085257 123449236 8085244 100838420
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