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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102580023   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 sly-u.5   101252922   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 nta-r.1   107814208   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 nta-r.1   107791047   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic-like 
 ath-u.5   LPA19   photosystem II 11 kDa protein-like protein 
 gma-u.5   100805317   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 gma-u.5   100797323   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 bra-r.6   103854582   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 vvi-u.5   100259756   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 ppo-u.5   7467490   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 mtr-u.5   25485214   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 ghi-r.1   121208457   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 ghi-r.1   107896634   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 bna-r.1   111206227   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 bna-r.1   106371195   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 cit-r.1   102627996   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 osa-u.5   4334100   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 zma-u.5   100276890   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 tae-r.2   123113304   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 tae-r.2   123105010   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 tae-r.2   123122814   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 hvu-r.1   123452216   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 sbi-r.1   8060474   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 bdi-r.1   100826702   photosystem II D1 precursor processing protein PSB27-H2, chloroplastic 
 cre-r.1   CHLRE_02g073850v5   uncharacterized protein 

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Top 50 coexpressed genes to 102580023 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102580023 (sot-r.1 coexpression data)

CoexMap"102580023"


sotLOC102580023 | Entrez gene ID : 102580023      
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 2 1 1 1 1 2 2 1 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010206 [list] [network] photosystem II repair  (4 genes)  IEA  
GO:0010207 [list] [network] photosystem II assembly  (6 genes)  IEA  
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (6 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (31 genes)  IEA  
GO MF
Protein XP_006360796.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  extr 4,  nucl 1,  mito 1  (predict for XP_006360796.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_006360796.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102580023
sly-u.5
for
101252922
nta-r.1
for
107814208
nta-r.1
for
107791047
ath-u.5
for
LPA19
gma-u.5
for
100805317
gma-u.5
for
100797323
bra-r.6
for
103854582
vvi-u.5
for
100259756
ppo-u.5
for
7467490
mtr-u.5
for
25485214
ghi-r.1
for
121208457
ghi-r.1
for
107896634
bna-r.1
for
111206227
bna-r.1
for
106371195
cit-r.1
for
102627996
osa-u.5
for
4334100
zma-u.5
for
100276890
tae-r.2
for
123113304
tae-r.2
for
123105010
tae-r.2
for
123122814
hvu-r.1
for
123452216
sbi-r.1
for
8060474
bdi-r.1
for
100826702
cre-r.1
for
CHLRE_02g073850v5


Ortholog ID: 10426
Species sot sly nta nta ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102580023 LOC101252922 LOC107814208 LOC107791047 LPA19 LOC100805317 LOC100797323 LOC103854582 LOC100259756 LOC7467490 LOC25485214 LOC121208457 LOC107896634 LOC111206227 LOC106371195 LOC102627996 LOC4334100 LOC100276890 LOC123113304 LOC123105010 LOC123122814 LOC123452216 LOC8060474 LOC100826702 CHLRE_02g073850v5
Function* photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic-like photosystem II 11 kDa protein-like protein photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic photosystem II D1 precursor processing protein PSB27-H2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00380 Tryptophan metabolism 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102580023 101252922 107814208 107791047 837040 100805317 100797323 103854582 100259756 7467490 25485214 121208457 107896634 111206227 106371195 102627996 4334100 100276890 123113304 123105010 123122814 123452216 8060474 100826702 5727167
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