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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102580441   protein ROOT PRIMORDIUM DEFECTIVE 1 
 sly-u.5   101251690   protein ROOT PRIMORDIUM DEFECTIVE 1 
 nta-r.1   107809370   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 nta-r.1   107787983   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ath-u.5   RPD1   Ubiquitin carboxyl-terminal hydrolase family protein 
 gma-u.5   100782167   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bra-r.6   103846652   protein ROOT PRIMORDIUM DEFECTIVE 1 
 vvi-u.5   100245174   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ppo-u.5   7474033   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ghi-r.1   121204595   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ghi-r.1   107906852   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ghi-r.1   107917531   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bna-r.1   106438534   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 cit-r.1   102625780   protein ROOT PRIMORDIUM DEFECTIVE 1 
 osa-u.5   4326607   protein ROOT PRIMORDIUM DEFECTIVE 1 
 osa-u.5   9267672   uncharacterized LOC9267672 
 zma-u.5   103633059   protein ROOT PRIMORDIUM DEFECTIVE 1 
 tae-r.2   123122251   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 tae-r.2   123112773   protein ROOT PRIMORDIUM DEFECTIVE 1 
 tae-r.2   123104485   protein ROOT PRIMORDIUM DEFECTIVE 1 
 hvu-r.1   123400017   protein ROOT PRIMORDIUM DEFECTIVE 1 
 sbi-r.1   8054879   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bdi-r.1   100833924   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bdi-r.1   100828204   protein ROOT PRIMORDIUM DEFECTIVE 1-like 

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Top 50 coexpressed genes to 102580441 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102580441 (sot-r.1 coexpression data)

CoexMap"102580441"


sotLOC102580441 | Entrez gene ID : 102580441    
Species sot sly nta ath gma bra vvi ppo ghi bna cit osa zma tae hvu sbi bdi cre mtr
Paralog 1 1 2 1 1 1 1 1 3 1 1 2 1 3 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
Protein XP_006357443.1 [sequence] [blastp]
XP_015168907.1 [sequence] [blastp]
XP_015168908.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 1  (predict for XP_006357443.1)
chlo 8,  cyto 1  (predict for XP_015168907.1)
chlo 8,  cyto 1  (predict for XP_015168908.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_006357443.1)
chlo 5  (predict for XP_015168907.1)
chlo 5  (predict for XP_015168908.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102580441
sly-u.5
for
101251690
nta-r.1
for
107809370
nta-r.1
for
107787983
ath-u.5
for
RPD1
gma-u.5
for
100782167
bra-r.6
for
103846652
vvi-u.5
for
100245174
ppo-u.5
for
7474033
ghi-r.1
for
121204595
ghi-r.1
for
107906852
ghi-r.1
for
107917531
bna-r.1
for
106438534
cit-r.1
for
102625780
osa-u.5
for
4326607
osa-u.5
for
9267672
zma-u.5
for
103633059
tae-r.2
for
123122251
tae-r.2
for
123112773
tae-r.2
for
123104485
hvu-r.1
for
123400017
sbi-r.1
for
8054879
bdi-r.1
for
100833924
bdi-r.1
for
100828204


Ortholog ID: 9061
Species sot sly nta nta ath gma bra vvi ppo ghi ghi ghi bna cit osa osa zma tae tae tae hvu sbi bdi bdi
Symbol LOC102580441 LOC101251690 LOC107809370 LOC107787983 RPD1 LOC100782167 LOC103846652 LOC100245174 LOC7474033 LOC121204595 LOC107906852 LOC107917531 LOC106438534 LOC102625780 LOC4326607 LOC9267672 LOC103633059 LOC123122251 LOC123112773 LOC123104485 LOC123400017 LOC8054879 LOC100833924 LOC100828204
Function* protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like protein ROOT PRIMORDIUM DEFECTIVE 1 Ubiquitin carboxyl-terminal hydrolase family protein protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 uncharacterized LOC9267672 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102580441 101251690 107809370 107787983 829487 100782167 103846652 100245174 7474033 121204595 107906852 107917531 106438534 102625780 4326607 9267672 103633059 123122251 123112773 123104485 123400017 8054879 100833924 100828204
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