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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103633059   protein ROOT PRIMORDIUM DEFECTIVE 1 
 zma-r.6   103633059   protein ROOT PRIMORDIUM DEFECTIVE 1 
 zma-m.5   103633059   protein ROOT PRIMORDIUM DEFECTIVE 1 
 sbi-r.1   8054879   protein ROOT PRIMORDIUM DEFECTIVE 1 
 osa-u.5   4326607   protein ROOT PRIMORDIUM DEFECTIVE 1 
 osa-u.5   9267672   uncharacterized LOC9267672 
 tae-r.2   123122251   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 tae-r.2   123112773   protein ROOT PRIMORDIUM DEFECTIVE 1 
 tae-r.2   123104485   protein ROOT PRIMORDIUM DEFECTIVE 1 
 hvu-r.1   123400017   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bdi-r.1   100833924   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bdi-r.1   100828204   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 ath-u.5   RPD1   Ubiquitin carboxyl-terminal hydrolase family protein 
 gma-u.5   100782167   protein ROOT PRIMORDIUM DEFECTIVE 1 
 sly-u.5   101251690   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bra-r.6   103846652   protein ROOT PRIMORDIUM DEFECTIVE 1 
 vvi-u.5   100245174   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ppo-u.5   7474033   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ghi-r.1   121204595   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ghi-r.1   107906852   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ghi-r.1   107917531   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bna-r.1   106438534   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 sot-r.1   102580441   protein ROOT PRIMORDIUM DEFECTIVE 1 
 cit-r.1   102625780   protein ROOT PRIMORDIUM DEFECTIVE 1 
 nta-r.1   107809370   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 nta-r.1   107787983   protein ROOT PRIMORDIUM DEFECTIVE 1 

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Top 50 coexpressed genes to 103633059 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103633059 (zma-u.5 coexpression data)

CoexMap"103633059"


zmaLOC103633059 | Entrez gene ID : 103633059      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo ghi bna sot cit nta cre mtr
Paralog 3 1 2 3 1 2 1 1 1 1 1 1 3 1 1 1 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein XP_008652963.1 [sequence] [blastp]
XP_008652964.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  chlo_mito 4  (predict for XP_008652963.1)
chlo 4,  mito 4,  chlo_mito 4  (predict for XP_008652964.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_008652963.1)
mito 7  (predict for XP_008652964.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103633059
zma-r.6
for
103633059
zma-m.5
for
103633059
sbi-r.1
for
8054879
osa-u.5
for
4326607
osa-u.5
for
9267672
tae-r.2
for
123122251
tae-r.2
for
123112773
tae-r.2
for
123104485
hvu-r.1
for
123400017
bdi-r.1
for
100833924
bdi-r.1
for
100828204
ath-u.5
for
RPD1
gma-u.5
for
100782167
sly-u.5
for
101251690
bra-r.6
for
103846652
vvi-u.5
for
100245174
ppo-u.5
for
7474033
ghi-r.1
for
121204595
ghi-r.1
for
107906852
ghi-r.1
for
107917531
bna-r.1
for
106438534
sot-r.1
for
102580441
cit-r.1
for
102625780
nta-r.1
for
107809370
nta-r.1
for
107787983


Ortholog ID: 9061
Species zma sbi osa osa tae tae tae hvu bdi bdi ath gma sly bra vvi ppo ghi ghi ghi bna sot cit nta nta
Symbol LOC103633059 LOC8054879 LOC4326607 LOC9267672 LOC123122251 LOC123112773 LOC123104485 LOC123400017 LOC100833924 LOC100828204 RPD1 LOC100782167 LOC101251690 LOC103846652 LOC100245174 LOC7474033 LOC121204595 LOC107906852 LOC107917531 LOC106438534 LOC102580441 LOC102625780 LOC107809370 LOC107787983
Function* protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 uncharacterized LOC9267672 protein ROOT PRIMORDIUM DEFECTIVE 1-like protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like Ubiquitin carboxyl-terminal hydrolase family protein protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like protein ROOT PRIMORDIUM DEFECTIVE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103633059 8054879 4326607 9267672 123122251 123112773 123104485 123400017 100833924 100828204 829487 100782167 101251690 103846652 100245174 7474033 121204595 107906852 107917531 106438534 102580441 102625780 107809370 107787983
The preparation time of this page was 3.9 [sec].