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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102583209   protein LOW PSII ACCUMULATION 1, chloroplastic 
 sly-u.5   101266362   protein LOW PSII ACCUMULATION 1, chloroplastic 
 ath-u.5   AT4G28740   LOW PSII ACCUMULATION-like protein 
 gma-u.5   100799768   protein LOW PSII ACCUMULATION 1, chloroplastic 
 ppo-u.5   7464416   protein LOW PSII ACCUMULATION 1, chloroplastic 
 mtr-u.5   25484170   protein LOW PSII ACCUMULATION 1, chloroplastic 
 osa-u.5   9270292   protein LOW PSII ACCUMULATION 1, chloroplastic 
 zma-u.5   100272297   uncharacterized LOC100272297 

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Top 50 coexpressed genes to 102583209 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102583209 (sot-r.1 coexpression data)

CoexMap"102583209"


sotLOC102583209 | Entrez gene ID : 102583209      
Species sot sly ath gma ppo mtr osa zma bdi hvu bra vvi cit bna sbi ghi nta cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_006350288.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  E.R. 1  (predict for XP_006350288.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_006350288.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102583209
sly-u.5
for
101266362
ath-u.5
for
AT4G28740
gma-u.5
for
100799768
ppo-u.5
for
7464416
mtr-u.5
for
25484170
osa-u.5
for
9270292
zma-u.5
for
100272297


Ortholog ID: 10886
Species sot sly nta nta ath gma bra ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi cre
Symbol LOC102583209 LOC101266362 LOC107823914 LOC107815410 AT4G28740 LOC100799768 LOC103861852 LOC7464416 LOC25484170 LOC107925896 LOC107955405 LOC106389783 LOC106410781 LOC102617291 LOC9270292 LOC100272297 LOC123053854 LOC123045976 LOC123427198 LOC8060225 LOC100835810 CHLRE_06g266900v5
Function* protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic LOW PSII ACCUMULATION-like protein protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic-like protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic uncharacterized LOC100272297 protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00710 Carbon fixation by Calvin cycle 5
sot01200 Carbon metabolism 5
sot01230 Biosynthesis of amino acids 5
sot00010 Glycolysis / Gluconeogenesis 3
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00900 Terpenoid backbone biosynthesis 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00900 Terpenoid backbone biosynthesis 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
ath00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00710 Carbon fixation by Calvin cycle 3
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 7
mtr01200 Carbon metabolism 7
mtr00630 Glyoxylate and dicarboxylate metabolism 5
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 5
zma01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102583209 101266362 107823914 107815410 828995 100799768 103861852 7464416 25484170 107925896 107955405 106389783 106410781 102617291 9270292 100272297 123053854 123045976 123427198 8060225 100835810 5721924
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