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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106410781   protein LOW PSII ACCUMULATION 1, chloroplastic-like 
 bna-r.1   106389783   protein LOW PSII ACCUMULATION 1, chloroplastic 
 bra-r.6   103861852   protein LOW PSII ACCUMULATION 1, chloroplastic 
 ath-u.5   AT4G28740   LOW PSII ACCUMULATION-like protein 
 ghi-r.1   107925896   protein LOW PSII ACCUMULATION 1, chloroplastic 
 ghi-r.1   107955405   protein LOW PSII ACCUMULATION 1, chloroplastic 
 cit-r.1   102617291   protein LOW PSII ACCUMULATION 1, chloroplastic 
 gma-u.5   100799768   protein LOW PSII ACCUMULATION 1, chloroplastic 
 ppo-u.5   7464416   protein LOW PSII ACCUMULATION 1, chloroplastic 
 mtr-u.5   25484170   protein LOW PSII ACCUMULATION 1, chloroplastic 
 sly-u.5   101266362   protein LOW PSII ACCUMULATION 1, chloroplastic 
 sot-r.1   102583209   protein LOW PSII ACCUMULATION 1, chloroplastic 
 nta-r.1   107823914   protein LOW PSII ACCUMULATION 1, chloroplastic 
 nta-r.1   107815410   protein LOW PSII ACCUMULATION 1, chloroplastic 
 osa-u.5   9270292   protein LOW PSII ACCUMULATION 1, chloroplastic 
 zma-u.5   100272297   uncharacterized LOC100272297 
 tae-r.2   123053854   protein LOW PSII ACCUMULATION 1, chloroplastic 
 tae-r.2   123045976   protein LOW PSII ACCUMULATION 1, chloroplastic 
 tae-r.2   123189727   protein LOW PSII ACCUMULATION 1, chloroplastic 
 hvu-r.1   123427198   protein LOW PSII ACCUMULATION 1, chloroplastic 
 sbi-r.1   8060225   protein LOW PSII ACCUMULATION 1, chloroplastic 
 bdi-r.1   100835810   protein LOW PSII ACCUMULATION 1, chloroplastic 
 cre-r.1   CHLRE_06g266900v5   uncharacterized protein 

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Top 50 coexpressed genes to 106410781 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106410781 (bna-r.1 coexpression data)

CoexMap"106410781"


bnaLOC106410781 | Entrez gene ID : 106410781    
Species bna bra ath ghi cit gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi
Paralog 2 1 1 2 1 1 1 1 1 1 2 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_013706838.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 4,  mito 1  (predict for XP_013706838.2)
Subcellular
localization
TargetP
chlo 4  (predict for XP_013706838.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106410781
bna-r.1
for
106389783
bra-r.6
for
103861852
ath-u.5
for
AT4G28740
ghi-r.1
for
107925896
ghi-r.1
for
107955405
cit-r.1
for
102617291
gma-u.5
for
100799768
ppo-u.5
for
7464416
mtr-u.5
for
25484170
sly-u.5
for
101266362
sot-r.1
for
102583209
nta-r.1
for
107823914
nta-r.1
for
107815410
osa-u.5
for
9270292
zma-u.5
for
100272297
tae-r.2
for
123053854
tae-r.2
for
123045976
tae-r.2
for
123189727
hvu-r.1
for
123427198
sbi-r.1
for
8060225
bdi-r.1
for
100835810
cre-r.1
for
CHLRE_06g266900v5


Ortholog ID: 10886
Species bna bna bra ath ghi ghi cit gma ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106410781 LOC106389783 LOC103861852 AT4G28740 LOC107925896 LOC107955405 LOC102617291 LOC100799768 LOC7464416 LOC25484170 LOC101266362 LOC102583209 LOC107823914 LOC107815410 LOC9270292 LOC100272297 LOC123053854 LOC123045976 LOC123189727 LOC123427198 LOC8060225 LOC100835810 CHLRE_06g266900v5
Function* protein LOW PSII ACCUMULATION 1, chloroplastic-like protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic LOW PSII ACCUMULATION-like protein protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic uncharacterized LOC100272297 protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic protein LOW PSII ACCUMULATION 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
ath00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00710 Carbon fixation by Calvin cycle 3
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 7
mtr01200 Carbon metabolism 7
mtr00630 Glyoxylate and dicarboxylate metabolism 5
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00710 Carbon fixation by Calvin cycle 5
sot01200 Carbon metabolism 5
sot01230 Biosynthesis of amino acids 5
sot00010 Glycolysis / Gluconeogenesis 3
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00900 Terpenoid backbone biosynthesis 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00900 Terpenoid backbone biosynthesis 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 5
zma01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106410781 106389783 103861852 828995 107925896 107955405 102617291 100799768 7464416 25484170 101266362 102583209 107823914 107815410 9270292 100272297 123053854 123045976 123189727 123427198 8060225 100835810 5721924
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