Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102584578   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 sly-u.5   101261877   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 nta-r.1   107792065   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 nta-r.1   107797340   pentatricopeptide repeat-containing protein At1g10910, chloroplastic-like 
 ath-u.5   EMB3103   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100809049   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 bra-r.6   103871869   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 vvi-u.5   100261803   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 ppo-u.5   18096625   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 ppo-u.5   7486675   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 mtr-u.5   11433858   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 ghi-r.1   107907708   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 ghi-r.1   107927989   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 bna-r.1   106350122   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 bna-r.1   106357945   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 cit-r.1   102607323   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 osa-u.5   4324682   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 zma-u.5   103651615   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 tae-r.2   123078392   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 tae-r.2   123069943   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 tae-r.2   123061310   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 hvu-r.1   123443707   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 sbi-r.1   8078600   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 
 bdi-r.1   100835537   pentatricopeptide repeat-containing protein At1g10910, chloroplastic 

close


Top 50 coexpressed genes to 102584578 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 102584578 (sot-r.1 coexpression data)

CoexMap"102584578"


sotLOC102584578 | Entrez gene ID : 102584578    
Species sot sly nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 1 1 2 1 1 1 1 2 1 2 2 1 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (10 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (11 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (606 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4214 genes)  IEA  
Protein XP_006343481.1 [sequence] [blastp]
XP_006343482.1 [sequence] [blastp]
XP_006343483.1 [sequence] [blastp]
XP_006343484.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_006343481.1)
chlo 5,  mito 3,  nucl 1,  cyto_mito 1  (predict for XP_006343482.1)
chlo 5,  mito 3,  nucl 1,  cyto_mito 1  (predict for XP_006343483.1)
chlo 6,  cyto 1,  extr 1,  nucl 1,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_006343484.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006343481.1)
chlo 9  (predict for XP_006343482.1)
chlo 9  (predict for XP_006343483.1)
other 3  (predict for XP_006343484.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102584578
sly-u.5
for
101261877
nta-r.1
for
107792065
nta-r.1
for
107797340
ath-u.5
for
EMB3103
gma-u.5
for
100809049
bra-r.6
for
103871869
vvi-u.5
for
100261803
ppo-u.5
for
18096625
ppo-u.5
for
7486675
mtr-u.5
for
11433858
ghi-r.1
for
107907708
ghi-r.1
for
107927989
bna-r.1
for
106350122
bna-r.1
for
106357945
cit-r.1
for
102607323
osa-u.5
for
4324682
zma-u.5
for
103651615
tae-r.2
for
123078392
tae-r.2
for
123069943
tae-r.2
for
123061310
hvu-r.1
for
123443707
sbi-r.1
for
8078600
bdi-r.1
for
100835537


Ortholog ID: 11042
Species sot sly nta nta ath gma bra vvi ppo ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC102584578 LOC101261877 LOC107792065 LOC107797340 EMB3103 LOC100809049 LOC103871869 LOC100261803 LOC18096625 LOC7486675 LOC11433858 LOC107907708 LOC107927989 LOC106350122 LOC106357945 LOC102607323 LOC4324682 LOC103651615 LOC123078392 LOC123069943 LOC123061310 LOC123443707 LOC8078600 LOC100835537
Function* pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic pentatricopeptide repeat-containing protein At1g10910, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00440 Phosphonate and phosphinate metabolism 3
ghi00564 Glycerophospholipid metabolism 3
ghi00565 Ether lipid metabolism 3
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102584578 101261877 107792065 107797340 837634 100809049 103871869 100261803 18096625 7486675 11433858 107907708 107927989 106350122 106357945 102607323 4324682 103651615 123078392 123069943 123061310 123443707 8078600 100835537
The preparation time of this page was 0.1 [sec].