ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102586006	protein ROOT PRIMORDIUM DEFECTIVE 1
sly-u.5	101251230	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
nta-r.1	107801438	protein WHAT'S THIS FACTOR 1, chloroplastic-like
nta-r.1	107829266	protein WHAT'S THIS FACTOR 1, chloroplastic-like
ath-u.5	emb1692	Ubiquitin carboxyl-terminal hydrolase family protein
gma-u.5	102665449	protein WHAT'S THIS FACTOR 1, chloroplastic
bra-r.6	103837441	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
vvi-u.5	100266927	protein WHAT'S THIS FACTOR 1, chloroplastic
ppo-u.5	7466191	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
mtr-u.5	25489668	protein WHAT'S THIS FACTOR 1, chloroplastic
ghi-r.1	107927448	protein WHAT'S THIS FACTOR 1, chloroplastic
ghi-r.1	107934814	protein WHAT'S THIS FACTOR 1, chloroplastic
bna-r.1	106366175	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
bna-r.1	106400689	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
cit-r.1	102628498	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
osa-u.5	4335458	protein WHAT'S THIS FACTOR 1, chloroplastic
zma-u.5	103625789	protein WHAT'S THIS FACTOR 1, chloroplastic
tae-r.2	123119343	protein WHAT'S THIS FACTOR 1, chloroplastic
tae-r.2	123110312	protein WHAT'S THIS FACTOR 1, chloroplastic
tae-r.2	123101180	protein WHAT'S THIS FACTOR 1, chloroplastic
hvu-r.1	123396215	protein WHAT'S THIS FACTOR 1, chloroplastic-like
sbi-r.1	8057098	protein ROOT PRIMORDIUM DEFECTIVE 1
bdi-r.1	100842188	protein WHAT'S THIS FACTOR 1

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003723 [list] [network] RNA binding

(1335 genes)

IEA

Protein

XP_006341334.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, pero 2, chlo_mito 2, nucl 1, cyto_pero 1

(predict for XP_006341334.1)

Subcellular
localization
TargetP

other 2

(predict for XP_006341334.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102586006	sly-u.5 for 101251230	nta-r.1 for 107801438	nta-r.1 for 107829266	ath-u.5 for emb1692	gma-u.5 for 102665449	bra-r.6 for 103837441	vvi-u.5 for 100266927	ppo-u.5 for 7466191	mtr-u.5 for 25489668	ghi-r.1 for 107927448	ghi-r.1 for 107934814	bna-r.1 for 106366175	bna-r.1 for 106400689	cit-r.1 for 102628498	osa-u.5 for 4335458	zma-u.5 for 103625789	tae-r.2 for 123119343	tae-r.2 for 123110312	tae-r.2 for 123101180	hvu-r.1 for 123396215	sbi-r.1 for 8057098	bdi-r.1 for 100842188