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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25489668   protein WHAT'S THIS FACTOR 1, chloroplastic 
 mtr-r.5   25489668   protein WHAT'S THIS FACTOR 1, chloroplastic 
 gma-u.5   102665449   protein WHAT'S THIS FACTOR 1, chloroplastic 
 ppo-u.5   7466191   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ath-u.5   emb1692   Ubiquitin carboxyl-terminal hydrolase family protein 
 vvi-u.5   100266927   protein WHAT'S THIS FACTOR 1, chloroplastic 
 sly-u.5   101251230   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 osa-u.5   4335458   protein WHAT'S THIS FACTOR 1, chloroplastic 
 zma-u.5   103625789   protein WHAT'S THIS FACTOR 1, chloroplastic 

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Top 50 coexpressed genes to 25489668 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25489668 (mtr-u.5 coexpression data)

CoexMap"25489668"


mtrLOC25489668 | Entrez gene ID : 25489668      
Species mtr gma ppo ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_024635684.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_024635684.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_024635684.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25489668

.
mtr-r.5
for
25489668

.
gma-u.5
for
102665449

.
ppo-u.5
for
7466191

.
ath-u.5
for
emb1692

.
vvi-u.5
for
100266927

.
sly-u.5
for
101251230

.
osa-u.5
for
4335458

.
zma-u.5
for
103625789

.


Ortholog ID: 11014
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol emb1692 LOC102665449 LOC101251230 LOC4335458 LOC103625789 LOC103837441 LOC100266927 LOC7466191 LOC25489668 LOC123110312 LOC123119343 LOC123396215 LOC107934814 LOC107927448 LOC106400689 LOC106366175 LOC8057098 LOC102586006 LOC102628498 LOC100842188 LOC107829266 LOC107801438
Function* Ubiquitin carboxyl-terminal hydrolase family protein protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1, chloroplastic-like protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 protein WHAT'S THIS FACTOR 1, chloroplastic-like protein WHAT'S THIS FACTOR 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836419 102665449 101251230 4335458 103625789 103837441 100266927 7466191 25489668 123110312 123119343 123396215 107934814 107927448 106400689 106366175 8057098 102586006 102628498 100842188 107829266 107801438
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