ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	102587471	uncharacterized LOC102587471
sot-r.1	102602206	uncharacterized LOC102602206
sly-u.5	101255669	uncharacterized LOC101255669
nta-r.1	107772071	uncharacterized LOC107772071
nta-r.1	107823203	uncharacterized LOC107823203
nta-r.1	107830382	uncharacterized LOC107830382
ath-u.5	AT3G47490	HNH endonuclease
ath-u.5	AT1G18680	HNH endonuclease domain-containing protein
gma-u.5	100775923	HNH endonuclease domain-containing protein
gma-u.5	100527904	uncharacterized LOC100527904
gma-u.5	100500174	HNH endonuclease domain-containing protein
bra-r.6	103873238	uncharacterized LOC103873238
bra-r.6	103842690	uncharacterized LOC103842690
vvi-u.5	100262165	uncharacterized LOC100262165
vvi-u.5	100852985	uncharacterized LOC100852985
ppo-u.5	7484739	uncharacterized LOC7484739
ppo-u.5	7491177	uncharacterized LOC7491177
mtr-u.5	25493821	uncharacterized LOC25493821
mtr-u.5	25493851	retrovirus-related Pol polyprotein from transposon TNT 1-94
ghi-r.1	107951260	uncharacterized LOC107951260
ghi-r.1	107946521	uncharacterized LOC107946521
ghi-r.1	107934257	uncharacterized LOC107934257
bna-r.1	106435358	uncharacterized LOC106435358
bna-r.1	106345244	uncharacterized LOC106345244
bna-r.1	106363816	uncharacterized LOC106363816
cit-r.1	102630238	uncharacterized LOC102630238
cit-r.1	102627352	uncharacterized LOC102627352
osa-u.5	4331767	uncharacterized LOC4331767
osa-u.5	4348343	uncharacterized LOC4348343
zma-u.5	100277163	uncharacterized LOC100277163
zma-u.5	100382155	HNH endonuclease
tae-r.2	123093310	uncharacterized LOC123093310
tae-r.2	123084776	uncharacterized LOC123084776
hvu-r.1	123401642	uncharacterized LOC123401642
hvu-r.1	123449560	uncharacterized LOC123449560
sbi-r.1	8067118	uncharacterized LOC8067118
sbi-r.1	8082121	uncharacterized LOC8082121
bdi-r.1	100825547	uncharacterized LOC100825547
bdi-r.1	100824123	uncharacterized LOC100824123
bdi-r.1	100831965	uncharacterized LOC100831965
cre-r.1	CHLRE_17g717400v5	uncharacterized protein

Top 50 coexpressed genes to 102587471 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 102587471 (sot-r.1 coexpression data)

CoexMap"102587471"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0004519 [list] [network] endonuclease activity	(169 genes)	IEA
GO:0008270 [list] [network] zinc ion binding	(768 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(3830 genes)	IEA

Protein

XP_006364805.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, mito 3, chlo 2, cyto_nucl 2, nucl_plas 2

(predict for XP_006364805.1)

Subcellular
localization
TargetP

chlo 8

(predict for XP_006364805.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102587471	sot-r.1 for 102602206	sly-u.5 for 101255669	nta-r.1 for 107772071	nta-r.1 for 107823203	nta-r.1 for 107830382	ath-u.5 for AT3G47490	ath-u.5 for AT1G18680	gma-u.5 for 100775923	gma-u.5 for 100527904	gma-u.5 for 100500174	bra-r.6 for 103873238	bra-r.6 for 103842690	vvi-u.5 for 100262165	vvi-u.5 for 100852985	ppo-u.5 for 7484739	ppo-u.5 for 7491177	mtr-u.5 for 25493821	mtr-u.5 for 25493851	ghi-r.1 for 107951260	ghi-r.1 for 107946521	ghi-r.1 for 107934257	bna-r.1 for 106435358	bna-r.1 for 106345244	bna-r.1 for 106363816	cit-r.1 for 102630238	cit-r.1 for 102627352	osa-u.5 for 4331767	osa-u.5 for 4348343	zma-u.5 for 100277163	zma-u.5 for 100382155	tae-r.2 for 123093310	tae-r.2 for 123084776	hvu-r.1 for 123401642	hvu-r.1 for 123449560	sbi-r.1 for 8067118	sbi-r.1 for 8082121	bdi-r.1 for 100825547	bdi-r.1 for 100824123	bdi-r.1 for 100831965	cre-r.1 for CHLRE_17g717400v5

Ortholog

Ortholog ID: 3233

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC102587471

uncharacterized LOC102602206

uncharacterized LOC101255669

uncharacterized LOC107823203

uncharacterized LOC107830382

uncharacterized LOC107827108

HNH endonuclease

HNH endonuclease domain-containing protein

uncharacterized LOC100527904

HNH endonuclease domain-containing protein

uncharacterized LOC103873238

uncharacterized LOC103842690

uncharacterized LOC100262165

uncharacterized LOC100852985

uncharacterized LOC7484739

uncharacterized LOC7491177

uncharacterized LOC25493821

retrovirus-related Pol polyprotein from transposon TNT 1-94

uncharacterized LOC107946521

uncharacterized LOC107934257

uncharacterized LOC107910717

uncharacterized LOC106435358

uncharacterized LOC106345244

uncharacterized LOC106363816

uncharacterized LOC102630238

uncharacterized LOC102627352

uncharacterized LOC4331767

uncharacterized LOC4348343

uncharacterized LOC100277163

HNH endonuclease

uncharacterized LOC123093310

uncharacterized LOC123127832

uncharacterized LOC123137599

uncharacterized LOC123401642

uncharacterized LOC123449560

uncharacterized LOC8067118

uncharacterized LOC8082121

uncharacterized LOC100825547

uncharacterized LOC100824123

uncharacterized LOC100831965

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3
sot03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3
nta00860	Porphyrin metabolism	2
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	3
vvi03040	Spliceosome	3
vvi03020	RNA polymerase	2
vvi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	7
mtr00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	3
ghi00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	3
ghi00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi03250	Viral life cycle - HIV-1	2
ghi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	4
bna00350	Tyrosine metabolism	2
bna00360	Phenylalanine metabolism	2
bna00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03020	RNA polymerase	2
osa03420	Nucleotide excision repair	2
osa03040	Spliceosome	2
osa03010	Ribosome	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	4
zma03420	Nucleotide excision repair	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3
tae03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	4
bdi00630	Glyoxylate and dicarboxylate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

102587471

102602206

101255669

107823203

107830382

107827108

823903

838449

100775923

100527904

100500174

103873238

103842690

100262165

100852985

7484739

7491177

25493821

25493851

107946521

107934257

107910717

106435358

106345244

106363816

102630238

102627352

4331767

4348343

100277163

100382155

123093310

123127832

123137599

123401642

123449560

8067118

8082121

100825547

100824123

100831965

5729278

The preparation time of this page was 0.1 [sec].


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	3	2	3	2	2	2	2	3	3	2	2	2	2	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102587471 (sot-r.1 coexpression data)

Top 50 enrichment test to 102587471 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**