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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   XOPG1   polygalacturonase 
 sly-u.5   PG2   polygalacturonase-2a 
 ath-u.5   PGAZAT   polygalacturonase ADPG2-like protein 
 ath-u.5   QRT2   Pectin lyase-like superfamily protein 
 vvi-u.5   100263423   probable polygalacturonase At1g80170 
 vvi-u.5   100855221   polygalacturonase 
 vvi-u.5   100257239   polygalacturonase 
 ppo-u.5   7468975   polygalacturonase 
 ppo-u.5   7478117   probable polygalacturonase At1g80170 
 mtr-u.5   11433078   probable polygalacturonase At1g80170 
 osa-u.5   4339483   probable polygalacturonase At1g80170 
 zma-u.5   103644217   polygalacturonase 
 zma-u.5   103644218   polygalacturonase ADPG1 

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Top 50 coexpressed genes to XOPG1 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to XOPG1 (sly-u.5 coexpression data)

CoexMap"102590850"


sotLOC102590850 | Entrez gene ID : 102590850    
Species sly ath vvi ppo mtr osa zma bdi hvu bra cit gma bna sbi ghi sot nta cre tae
Paralog 2 2 3 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot00040 [list] [network] Pentose and glucuronate interconversions (125 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (739 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (56 genes)  IEA  
Protein XP_006345284.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  plas 1,  extr 1,  golg_plas 1  (predict for XP_006345284.1)
Subcellular
localization
TargetP
other 7,  mito 5  (predict for XP_006345284.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
XOPG1
sly-u.5
for
PG2
ath-u.5
for
PGAZAT
ath-u.5
for
QRT2
vvi-u.5
for
100263423
vvi-u.5
for
100855221
vvi-u.5
for
100257239
ppo-u.5
for
7468975
ppo-u.5
for
7478117
mtr-u.5
for
11433078
osa-u.5
for
4339483
zma-u.5
for
103644217
zma-u.5
for
103644218


Ortholog ID: 458
Species sot sot sly sly nta nta ath vvi ppo mtr ghi cit osa zma zma bdi
Symbol LOC102594305 LOC102585179 PG2 LOC101264436 LOC107824130 LOC107779855 QRT2 LOC100243033 LOC7478117 LOC11433078 LOC107950651 PG LOC4339483 LOC103644217 LOC103644218 LOC100829282
Function* probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 polygalacturonase-2a probable polygalacturonase At1g80170 polygalacturonase-2-like probable polygalacturonase At1g80170 Pectin lyase-like superfamily protein polygalacturonase probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 polygalacturonase QRT2 polygalacturonase probable polygalacturonase At1g80170 polygalacturonase polygalacturonase ADPG1 uncharacterized LOC100829282
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
sot00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 3
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 4
ath04981 Folate transport and metabolism 4
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
ath00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 4
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102594305 102585179 544051 101264436 107824130 107779855 819988 100243033 7478117 11433078 107950651 102578026 4339483 103644217 103644218 100829282
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