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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102594068   transcriptional activator DEMETER-like 
 sly-u.5   DML2   DNA demethylase 2 
 sly-u.5   DML3   DNA demethylase 3 
 sly-u.5   DML1   DNA demethylase1 
 ath-u.5   DML1   demeter-like 1 
 ath-u.5   DML2   demeter-like 2 
 ath-u.5   DML3   demeter-like protein 3 
 gma-u.5   100779756   DNA glycosylase/AP lyase ROS1 
 gma-u.5   100787368   protein ROS1A 
 vvi-u.5   100247223   transcriptional activator DEMETER 
 vvi-u.5   100257983   transcriptional activator DEMETER 
 ppo-u.5   7479830   transcriptional activator DEMETER 
 ppo-u.5   7491643   transcriptional activator DEMETER 
 mtr-u.5   25483895   DNA glycosylase/AP lyase ROS1 
 mtr-u.5   25485813   transcriptional activator DEMETER 
 osa-u.5   4338940   protein ROS1 
 osa-u.5   4329407   DNA glycosylase/AP lyase ROS1 
 osa-u.5   9271145   protein ROS1A-like 
 zma-u.5   100382817   uncharacterized LOC100382817 
 zma-u.5   100280151   uncharacterized LOC100280151 
 zma-u.5   109939959   protein ROS1A 

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Top 50 coexpressed genes to 102594068 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102594068 (sot-r.1 coexpression data)

CoexMap"102594068"


sotLOC102594068 | Entrez gene ID : 102594068    
Species sot sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi nta cre tae
Paralog 1 3 3 2 2 2 2 3 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0141166 [list] [network] chromosomal 5-methylcytosine DNA demethylation pathway  (4 genes)  IEA  
GO:0006284 [list] [network] base-excision repair  (32 genes)  IEA  
GO CC
GO MF
GO:0035514 [list] [network] DNA demethylase activity  (6 genes)  IEA  
GO:0019104 [list] [network] DNA N-glycosylase activity  (24 genes)  IEA  
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (25 genes)  IEA  
Protein XP_006342913.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006342913.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006342913.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102594068
sly-u.5
for
DML2
sly-u.5
for
DML3
sly-u.5
for
DML1
ath-u.5
for
DML1
ath-u.5
for
DML2
ath-u.5
for
DML3
gma-u.5
for
100779756
gma-u.5
for
100787368
vvi-u.5
for
100247223
vvi-u.5
for
100257983
ppo-u.5
for
7479830
ppo-u.5
for
7491643
mtr-u.5
for
25483895
mtr-u.5
for
25485813
osa-u.5
for
4338940
osa-u.5
for
4329407
osa-u.5
for
9271145
zma-u.5
for
100382817
zma-u.5
for
100280151
zma-u.5
for
109939959


Ortholog ID: 951
Species sot sot sly sly nta nta ath ath gma bra bra vvi ppo ppo mtr ghi ghi bna bna cit cit osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC102594068 LOC102605689 DML4 DML2 LOC107760412 LOC107813452 DML1 DML3 LOC100788292 LOC103847276 LOC103867278 LOC100247223 LOC18096903 LOC7479830 LOC25483895 LOC107902775 LOC107918161 LOC125609294 LOC106433122 LOC102619180 LOC102612881 LOC4338944 LOC9271145 LOC103630409 LOC100280151 LOC123064105 LOC123141492 LOC123446041 LOC123452140 LOC8061201 LOC8072510 LOC100823585 LOC100844361 CHLRE_07g355466v5
Function* transcriptional activator DEMETER-like protein ROS1 DNA demethylase 4 DNA demethylase 2 DNA glycosylase/AP lyase ROS1 protein ROS1A-like demeter-like 1 demeter-like protein 3 DNA glycosylase/AP lyase ROS1 transcriptional activator DEMETER DNA glycosylase/AP lyase ROS1 transcriptional activator DEMETER DEMETER-like protein 3 transcriptional activator DEMETER DNA glycosylase/AP lyase ROS1 uncharacterized LOC107902775 transcriptional activator DEMETER DNA glycosylase/AP lyase ROS1-like transcriptional activator DEMETER-like DNA glycosylase/AP lyase ROS1-like DNA glycosylase/AP lyase ROS1 protein ROS1C-like protein ROS1A-like Protein ROS1 uncharacterized LOC100280151 protein ROS1C protein ROS1C protein ROS1C-like protein ROS1A-like protein ROS1 uncharacterized LOC8072510 protein ROS1 protein ROS1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta03022 Basal transcription factors 2
nta04120 Ubiquitin mediated proteolysis 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 3
bra01200 Carbon metabolism 3
bra00010 Glycolysis / Gluconeogenesis 2
bra00020 Citrate cycle (TCA cycle) 2
bra00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 3
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03440 Homologous recombination 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102594068 102605689 101251080 101263652 107760412 107813452 818224 829552 100788292 103847276 103867278 100247223 18096903 7479830 25483895 107902775 107918161 125609294 106433122 102619180 102612881 4338944 9271145 103630409 100280151 123064105 123141492 123446041 123452140 8061201 8072510 100823585 100844361 66054234
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